Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Sort descending Gene ID
3444_ssr5121-sacB ATGCTCAAATTTATAGGCATTGCAT… hypothetical protein
3254_sll7086-sacB ATGCCAAACTTTGACCCCCGTACCA… hypothetical protein Cmr5
3318_slr8044-sacB ATGGGATCTATGACCGCCGAAGAAG… hypothetical protein
2876_sll0494-sacB ATGGTAGCAAGAGCTATTTTGCTGC… hypothetical protein
2814_slr0023-sacB ATGTTTTCTCCCAGTTCTGTTAGAA… hypothetical protein
2624_slr0514-sacB ATGGTTTTGGCAGGATCAAACGCCG… hypothetical protein
2436_sll0369-sacB ATGCAGAATTTTTTTGTCATTGGTT… hypothetical protein
2246_slr0217-sacB ATGGCAGACGCCATTGAAGTTAAAA… hypothetical protein
2184_slr0345-sacB ATGACGAATACTAAGACTACCCCCA… hypothetical protein
1680_sll1373-sacB ATGGGCCTGCTATTTCTGAAACTAA… hypothetical protein
1240_slr0870-sacB ATGCAAATTATCTACGACGAATTCC… hypothetical protein
0043_sll1396-sacB ATGAACTTTGATCTTTCAAAGCTAA… hypothetical protein
3475_ssr6020-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3413_sll5090-sacB ATGTCCATCGCTGGAAAATCCAAAG… hypothetical protein
3099_ssl0832-sacB GTGGCGATGACTAGGAGGTGGGCAG… hypothetical protein
2721_ssl0511-sacB GTGAGACTTAAGATGGGGGGCAAAA… hypothetical protein
2531_slr0579-sacB ATGAAACGGAACTATCTACTGACGG… hypothetical protein
2027_slr1939-codA ATGAATGCCCATGAAATTGCCCTGA… hypothetical protein
1775_slr1670-sacB ATGAAAACATTGAATCGTATCCATC… hypothetical protein
1523_sll1219-sacB ATGCACTACGCCATCCCCAAAACCT… hypothetical protein
1083_slr1866-sacB ATGCAAAGCTGGCGACACAGGTTCC… hypothetical protein
0831_sll1965-sacB GTGTGGTTTCCCGAACTCAGGGCAA… hypothetical protein
3507_sll6052-sacB ATGTTGAACCGTTTTTGGGTATGGT… hypothetical protein
3445_sll5122-sacB ATGAACAGTATTGCCCTGGTGGATT… hypothetical protein
3193_slr7025-sacB ATGAATATAACCTTTAAGTTTAACT… hypothetical protein
3067_slr1658-sacB ATGAGCACTGACCAAACCAACGTCA… hypothetical protein
2563_ssl1533-sacB ATGTCTGACCACACCGCCCAGATTA… hypothetical protein
2247_ssr0349-codA ATGTTGGTGCCCATTCTCATTTTTG… hypothetical protein
1429_sll1426-sacB GTGATGAAATCTTTACTGCGGGGAA… hypothetical protein
0926_slr1222-sacB ATGATTGGACAGGTAGTTAGGCTTG… hypothetical protein
0612_ssr2315-sacB ATGTTTAAACCCAGCTTACTTTTGT… hypothetical protein
0422_sll1511-sacB ATGACGCTGTTAAGTAAACTCCTAG… hypothetical protein
0360_slr1084-sacB ATGCAACTTAATCAATACCAGCAAG… hypothetical protein
0170_sll1318-sacB ATGCCCTCGTCACCAGTTCAATTTA… hypothetical protein
3476_slr6021-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3540_ssr6085-sacB ATGCACCACGACACCAAAGAAGCGA… hypothetical protein
3414_ssl5091-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
2974_sll0623-sacB ATGGTGGTCGAGAAGCTATTGATTG… hypothetical protein
1714_ssr2130-sacB ATGACGACCCATTTCATCACTGCTG… hypothetical protein
1462_ssr3570-sacB ATGTCGGACGTGATGATCCGGGTAG… hypothetical protein
1210_slr0852-sacB ATGTTACACTTCGCCCAAATTACCA… hypothetical protein
0328_slr1612-sacB ATGTCTGCCATAACTGCCCAAGAGT… hypothetical protein
0138_slr0250-sacB ATGGTTCGTTTGCTCATGGTATTCC… hypothetical protein
3508_sll6053-sacB ATGAACAATCAAATTAGTTTGACTC… hypothetical protein
3572_sll1749a-sacB hypothetical protein
3194_slr7026-sacB GTGCTTAAAATGAATTCCCCAACTT… hypothetical protein
3068_slr1659-sacB ATGGAAATAACCACTGAAGACTATC… hypothetical protein
2942_ssr2439-sacB ATGCAAGCACAAACTTTCTCCCACC… hypothetical protein
2564_slr0845-sacB GTGTCCGGTAAAAAAAATGATTACG… hypothetical protein
1492_sll1241-sacB ATGGGTATTACATCAAAAATATTTG… hypothetical protein
1178_slr1819-sacB ATGGAAGCCAAGGAATTGGTCCAAC… hypothetical protein
1053_ssl2595-sacB GTGGCTAAGTATGTGCTTTGGGGAA… hypothetical protein
3477_slr6022-sacB GTGGTTGCCCCTGCGGGGCATTTTT… hypothetical protein
3541_ssr6086-sacB ATGTATTTTGACCGTTTCGACATTG… hypothetical protein
3351_sll5028-sacB GTGGGAAGCAGTATTGAATCCGTTG… hypothetical protein
3415_ssr5092-sacB ATGATTAACCAAGCTATTCAATTAG… hypothetical protein
2911_sll0524-sacB ATGGTAGTCTACGCCAGTCCTACTT… hypothetical protein
2785_sll0664-sacB ATGATAGCTGATAGTTTTTTACTTA… hypothetical protein
2029_ssr3300-codA GTGGTGGTGCAGGTTTACGGTTCTA… hypothetical protein
2093_sll0168-sacB GTGTTGATGAAATGTTGGTTAGCGG… hypothetical protein
1903_sll0423-sacB ATGTTGACCCACCACCGTCGTCCGG… hypothetical protein
1525_sll1217-sacB ATGTCAGAGCTTCAAACCCTGATCC… hypothetical protein
0959_slr1240-sacB ATGGCCAGAAAATCAAAAGAATTTC… hypothetical protein
0455_sll1011-sacB GTGGGCCATTGCACAGCGGTGATTA… hypothetical protein
3509_sll6054-sacB GTGATGACTTTTTTACCTGAGAGCG… hypothetical protein
3257_sll7089-sacB ATGTATTGGTATAGCCTCACTCCCC… hypothetical protein Cmr3
3321_ssr8047-sacB ATGTCATTGGATAGACAATTAAACC… hypothetical protein
3195_sll7027-sacB GTGGTACTCGGGCTAAATCCTGGTG… hypothetical protein
2627_sll0473-sacB GTGTTGGCCGGAATAGGTGCATTGA… hypothetical protein
1493_sll1240-sacB ATGAATAATCATATTCAGGAAGATT… hypothetical protein
1431_slr1505-sacB ATGGATTTTCTCGCCTCCGAGTCCT… hypothetical protein
1241_slr0871-sacB ATGAAAACCGACAAAATTGGCTACC… hypothetical protein
1054_sll1315-sacB ATGAAGCATATATTTAGGTTTAAAA… hypothetical protein
0550_slr1907-sacB ATGGAGTTGGCGGGCTTGGCTATGG… hypothetical protein
0614_ssr2317-sacB GTGCCTGCCGAGAATTTGGCTTTGA… hypothetical protein
0488_slr1767-sacB ATGAATATTTGGGTTGATGCTCAAC… hypothetical protein
0362_slr1087-sacB GTGGCCTGTGGGGTTTCCCCCGATG… hypothetical protein
3478_ssl6023-sacB ATGAGTGGCCGAGGTCGTCCTGGTG… hypothetical protein
2534_slr0581-sacB ATGAAAAATTCCTATTCCGCTCTCT… hypothetical protein
2030_sll1845-sacB GTGTTTATGATTCCAGCTTGGCTAT… hypothetical protein
2094_sll0167-codA ATGTTTACCAAAATCCGTGACCTTG… hypothetical protein
1968_slr0144-sacB ATGGGTTACCTGCCAAGCCAAACTG… hypothetical protein
1526_ssr1375-sacB GTGTCAGCTACCCAGGTAGACGTTT… hypothetical protein
1086_sll1775-sacB ATGTCCCTGTTAGTCCAGAAACCTG… hypothetical protein
0960_slr1241-sacB ATGCAAATTTCCCCAGCATTTAAAT… hypothetical protein
0708_slr1135-sacB ATGATTGAAGATAATCAGTCCCACA… hypothetical protein
0266_ssl2384-sacB ATGTTTGATCGTTCCAACAAAGATT… hypothetical protein
0078_slr1127-sacB ATGCCGTTAGAATGGAAAGGAGGGC… hypothetical protein
0204_ssr2972-sacB GTGTCAGGATTCAATCAACAGTTAA… hypothetical protein
3510_sll6055-sacB GTGGTGGTAAATGCACAGCAATTCA… hypothetical protein
3448_ssl5125-sacB ATGGGAAAAGCAGTTGCCTTTGGCA… hypothetical protein
3196_sll7028-sacB ATGAGCGATGATTGCCAAGCTCTGC… hypothetical protein
1998_slr1923-sacB ATGACCGTTCCTGCCCCCCACCAGA… hypothetical protein bciB
1494_sll1239-sacB GTGACCAATAATTTGACTTCAGACC… hypothetical protein
0551_slr1908-sacB ATGAATAAGTTGACCAGTCATTTAC… hypothetical protein
0425_slr1599-sacB GTGAGTATTCCCCTGGCTACGGGAT… hypothetical protein
3479_ssr6024-sacB ATGACTATTCAAGAAGCCAAAGAGA… hypothetical protein
3543_slr6088-sacB ATGCTCCTAGCCGAAATTCTCGAAA… hypothetical protein
3291_sll8017-sacB GTGACAGAATTGGCCCAGGAAGCCG… hypothetical protein
2535_slr0582-sacB ATGGCAGGATTGCGTCAAAATTTGA… hypothetical protein
2409_sll0394-sacB ATGCGTAACCAGTATTTTTCCCTCA… hypothetical protein
1969_slr0145-sacB ATGATTCATCAAGCCCAGTGGGGGC… hypothetical protein
0583_slr1024-sacB ATGTCCCTAGAGCGTCAAACTTTAA… hypothetical protein
3385_sll5062-sacB ATGGGGAGTTTTGGGCTATTGTTCA… hypothetical protein
3449_slr5126-sacB ATGAAAAAATTACTATTATTGTTAA… hypothetical protein
3259_slr7091-sacB GTGTTTAAAAAACTTCATACTATTT… hypothetical protein
3133_slr0587-sacB ATGATTACCGTCGCACGAAAAACTA… hypothetical protein
3007_slr1576-sacB ATGGGCAATCGATCTCGTTTTGGGG… hypothetical protein
2441_sll0188-sacB ATGGAGACTGGGACCGTCAAAGTTT… hypothetical protein
1873_sll1531-sacB ATGTTAGTTCCCCTTCTTGGTTTGG… hypothetical protein
1937_ssl0483-sacB ATGGGGTTTGCGGATCTGTCGATTC… hypothetical protein
1621_slr1970-sacB ATGAGCATCCAAGAAATCTTTACCA… hypothetical protein
1434_ssl2781-sacB ATGCAAAAAGCCGACGAATTTGCCA… hypothetical protein
1056_slr1403-codA ATGGCTGCCTCTACCCAGACTCCGG… hypothetical protein
0678_ssr3409-sacB ATGGTACGAAATTCATTATCTTGGC… hypothetical protein
0426_slr1600-sacB ATGGACGATACTAACACCACATTAC… hypothetical protein
3544_ssr6089-sacB ATGGGACTTTTAAGTTATGGTCTTG… hypothetical protein
3292_sll8018-sacB GTGGTCATGGGGATAATCAAGAATC… hypothetical protein
3102_slr0455-sacB ATGAAGACAACGTTGTTTTCGGTAA… hypothetical protein
3040_sll0732-sacB ATGGCCAAACCAGTTAATTTGCCTG… hypothetical protein
2474_ssr1513-sacB ATGGCGATCGCCAAATTTGAATTTC… hypothetical protein
2032_ssr3304-codA ATGCAGTGGCAAGAATCTTTACCCT… hypothetical protein
1592_sll1247-sacB GTGTCTTTGACCTTATCTCATGATT… hypothetical protein
1214_sll0857-sacB ATGCTCGGCGGGCCATGCGGGAATT… hypothetical protein
1088_slr1869-sacB ATGATAACTATGAATTTTAAACTGG… hypothetical protein
0836_ssl3712-sacB GTGGGGGAAACCAAATTGACAGCAG… hypothetical protein
0584_slr1025-sacB ATGAAAAATAAGTTGGGAATAATAT… hypothetical protein
0142_ssl0410-sacB ATGAGTGTAACTATAGAAACCGATT… hypothetical protein
0206_slr1774-sacB ATGGGCCCAACTATGAAATCTTTAG… hypothetical protein
3386_sll5063-sacB GTGATAGCCTTGCTTCAGCGAGGGG… hypothetical protein
3450_slr5127-sacB ATGAGAAAAATCTCAATTAACAGAT… hypothetical protein
2316_sll0062-sacB ATGCCCTCCTTGGGCTGTTGCTATA… hypothetical protein
2126_slr0373-sacB ATGGGTAACCTAATCATTAGTGATA… hypothetical protein
1622_slr1971-sacB ATGGGTTTTCGTCGCTATCAAAGTT… hypothetical protein
1119_sll1757-sacB ATGGGGGGAAAGTGCTTAGCTAAGA… hypothetical protein
0679_ssr3410-sacB ATGATCACCACCATCATTAACTGGC… hypothetical protein
0617_ssr2318-sacB ATGAAGAGTTACCGGCGCTTGAAAC… hypothetical protein
0365_sll1024-sacB GTGCTAGTGTGTATGGCCTTTTCCC… hypothetical protein
0113_slr0740-sacB ATGCTGGGAAATTTTCAACATAGCC… hypothetical protein
3481_ssr6026-sacB ATGCACCACGACACCAAAGAAGCGA… hypothetical protein
3545_slr6090-sacB ATGAAGCATTATAAAACTTCACACG… hypothetical protein
3419_ssl5096-sacB ATGATGACTAATTTTATTGATCTTG… hypothetical protein
3293_sll8019-sacB GTGCTAACGACCAAGCATCTGCCCC… hypothetical protein
3103_slr0456-sacB ATGGAAGATTGGGAGAAAAACCTCT… hypothetical protein
2977_ssr1114-sacB ATGATGAGAGCTTTTGAGGTAATGG… hypothetical protein
1971_slr0147-sacB ATGGCTCGAAGGTATGGTTCAAGCC… hypothetical protein
1781_slr1677-sacB GTGACCACCTGGGTTCGTCCTGTTG… hypothetical protein
1655_ssl2717-sacB ATGGAAAAAATTTGGGTCAATGAAC… hypothetical protein
1719_sll1446-sacB ATGGAAACTGAGCAACTTCTTTGGC… hypothetical protein
0521_slr2037-sacB GTGCGATTCAACGATTCTGAGCTTC… hypothetical protein
3451_sll5128-sacB ATGACGACTCAATCTCTCACTGCTG… hypothetical protein
3325_sll5002-sacB ATGCCTGACATTCAAACTTGGGAAT… hypothetical protein
2443_slr0192-sacB ATGACTTCCATGCCCATCGAAATTT… hypothetical protein
2317_slr0058-sacB ATGGTTTTTGCTATGGTTGACGAGA… hypothetical protein
2233_sll0010-codA GTGATTAAAATTCGAGGCTTTCCGG… hypothetical proteins
1076_slr1860-sacB ATGAAAATGAAACTGATTCAACCTT… ICFG protein icfG
2603_slr0500-sacB ATGCCGGAGTCATCCACCCCTTCCC… imidazoleglycerol-phosphate dehydratase hisB
2580_sll0084-sacB GTGCAGTTACCGGCCGGTGCCGGGG… imidazoleglycerol-phosphate dehydratase; histidinol-phosphatase hisB
3512_slr6057-sacB ATGGCAAGACGAAAGCAACCAAAAT… ImmA/IrrE family metallo-endopeptidase
2082_slr0172-sacB ATGAGCAGAACGGTTGGGGAAGTGA… IMP dehydrogenase guaB
1334_slr1722-sacB GTGAACATTACGATTGGACGGGGAA… IMP dehydrogenase subunit guaB
2894_slr0546-sacB ATGGAAATTCGCCGCCGGCCTCCTA… indole-3-glycerol phosphate synthase trpC
0751_ssl3441-sacB ATGGAAGGCACGGTGATGGAGTCAT… initiation factor IF-1 infA
0118_slr0744-codA ATGAACAACGCCAAAGTCAGAATTT… initiation factor IF-2 infB
0312_slr0974-sacB GTGGCCGATAAAAGAAGACCCCAAC… initiation factor IF-3 infC
1853_slr1622-sacB ATGGCAGGGGAAAATAGACCATGGA… inorganic pyrophosphatase ppa
2938_sll1329-sacB GTGATGATGGCCATATTGCCCTTGT… inositol monophosphatase
1136_sll2009-sacB ATGCGTAATCATCAGTCCATCCATC… insulinase family protein
1137_sll2008-sacB ATGGATATACGCCTTGTGTCTGTGC… insulinase family protein
0716_sll1081-sacB ATGACTATTGCCCAGGATAAATTAT… integral membrane components of other binding-protein-dependent transport system
3141_sll0574-sacB ATGGCTCTTTCGCTACCGACAAGGG… integral membrane O-antigen translocator protein rfbA
0104_slr0733-sacB ATGTTCCTCCCTTCCCCTAACAATT… integrase-recombinase protein xerC
0629_ssr2333-sacB ATGACGTTATTGGATTTATCGGTGG… iron ABC transporter
1385_sll0238-sacB ATGCGATCGCCAACTAGCTTTGGGG… iron ABC transporter permease
1886_slr1647-sacB ATGGAACACGCCTTAATCGAACTGG… iron export ABC transporter permease subunit FetB fetB
0264_slr1295-sacB ATGGTCCAAAAGTTATCCCGTCGCC… iron transport protein sufA
2061_slr0327-sacB GTGTTTAATTTTTTGACCGTTCTCC… iron utilization protein hitB/futB
0015_slr1319-sacB ATGAAAAGTAAACTAATAATTTTTA… iron(III) dicitrate transport system permease protein; FecB fecB
0012_slr1316-sacB GTGCCCTTTCTCCAATGCATTATGC… iron(III) dicitrate transport system permease protein; FecC fecC
0013_slr1317-sacB ATGTTTGCCCCTCGACCTTGGATTG… iron(III) dicitrate transport system permease protein; FecD fecD
0014_slr1318-sacB ATGTTGGATGTTGCCACTCCCATTG… iron(III) dicitrate transport system permease protein; FecE fecE
0032_slr1491-sacB ATGCACAGATCGGGTCGTAGATTTA… iron(III) dicitrate-binding periplasmic protein fecB
0033_slr1492-sacB ATGTTAGTGGTGGCCTGTCAAAATC… iron(III) dicitrate-binding periplasmic protein fecB
0461_sll1009-sacB ATGGCTCTCATTAACGGAACGAATG… iron-regulated protein frpC
0020_sll1202-sacB ATGAAAAAATATAAGATAAATTACT… iron-siderophore ABC transporter substrate-binding protein
1370_sll0247-sacB GTGCAAACCTATGGCAACGACACCG… iron-stress chlorophyll-binding protein isiA
2994_slr1565-sacB ATGCTGCAATTGACCCCCAGTGCCG… iron-sulfur cluster assembly accessory protein
0168_slr1417-sacB ATGAGCCAAGCCACCGCTACCCAAG… iron-sulfur cluster assembly accessory protein
2573_sll0088-sacB ATGGGGGTTGTCCTTTCAGTTTACT… iron-sulfur cluster biosynthesis transcriptional regulator sufR
1548_sll0811-sacB GTGCAACTGTTCCGAGTTACGGTGT… IS4 transposase
1549_sll0810-sacB GTGAGCCATAACCGAATTAAACGTT… IS701 family transposase
1551_slr0817-sacB ATGTCCGTTGCGACACCCCTCCTCG… isochorismate synthase entC
0257_slr1289-sacB ATGTACGAAAAACTTCAGCCCCCCA… isocitrate dehydrogenase (NADP+) icd
0967_sll1362-sacB GTGACTGAAGCCAAAAGTTATAAAG… isoleucyl-tRNA synthetase ileS
1147_slr2143-sacB ATGGCTGACCCTGTGAACCTGATAC… isopenicillin N epimerase cefD
2860_sll0506-sacB ATGACTATTAAACCTGTCATCTTAG… isoprenyl transferase
3120_slr1182-sacB ATGAATCAATTTAGGGACTGGGGTT… isoprenylcysteine carboxylmethyltransferase family protein
1668_sll1384-sacB ATGAGCTCGTTTCCCATCAAGCAAG… J domain-containing protein
1343_sll1596-sacB ATGGAAAATTTAAACGCTCTATCTG… KaiB-like protein 1
2956_sll1363-sacB ATGCAGAATTTGATCCTACAACACT… ketol-acid reductoisomerase ilvC