Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name Sort descending CDS Gene Homology Gene ID
3401_slr5078-sacB ATGAAATTTTCCTTTCCTTGGCACT… hypothetical protein
3402_sll5079-sacB ATGATTCTCGTCAGTTTGTATCCGT… glucose 1-dehydrogenase
3403_sll5080-sacB ATGAGCACCATCACTACCAAAGACG… non-heme chloroperoxidase
3404_sll5081-sacB ATGAATGAGAAATTTTTCAAATTAG… DUF1963 domain-containing protein
3405_slr5082-sacB ATGTTTGACAATCTGTGCAAATTTC… Rpn family recombination-promoting nuclease/putative transposase
3406_sll5083-sacB ATGATATTTCCCTTTGATATAAATA… hypothetical protein
3407_sll5084-sacB GTGTCATTGAGTGGGGCTATTTTAT… thermonuclease family protein
3408_slr5085-sacB ATGACACTCCCTGCAATTATGAAAT… hypothetical protein
3409_sll5086-sacB ATGACAACCTCGCCTAATCAGACCC… GntR family transcriptional regulatory protein
3410_slr5087-sacB ATGCCAGTACCTGCAGAATATCAGC… DUF2267 domain-containing protein
3411_slr5088-sacB ATGAAGTTAATGGTTATTGGTGCAA… SDR family oxidoreductase
3412_sll5089-sacB GTGGCCCAGCCAGCAGTCGAAGCCT… metal-dependent hydrolase
3413_sll5090-sacB ATGTCCATCGCTGGAAAATCCAAAG… hypothetical protein
3414_ssl5091-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
3415_ssr5092-sacB ATGATTAACCAAGCTATTCAATTAG… hypothetical protein
3416_slr5093-sacB ATGATCAGGCGACGAAGTTTTTTTA… FAD-dependent oxidoreductase
3417_sll5094-sacB ATGAAGGGTTGGCTATTGGATACCA… type II toxin-antitoxin system VapC family toxin
3418_ssl5095-sacB ATGACTAATTCAGCAACCCAAGGTC… type II toxin-antitoxin system prevent-host-death family antitoxin
3419_ssl5096-sacB ATGATGACTAATTTTATTGATCTTG… hypothetical protein
3420_sll5097-sacB ATGACGGCTCAAAATGTACTTTCCC… WYL domain-containing protein
3421_ssl5098-sacB ATGAAAAGTCGGCGATTATCTATCC… hypothetical protein
3422_ssl5099-sacB ATGAAAGGTGATCATTATTCTCCTA… HNH endonuclease
3423_ssl5100-sacB ATGCAGTCCTTTAATCGACGATCGC… hypothetical protein
3424_slr5101-sacB ATGCGAAGACGCAGACCTACCAGGC… hypothetical protein
3425_slr5102-sacB ATGTCTAGCACCCTGGCAATCACAG… nucleotidyl transferase AbiEii/AbiGii toxin family protein
3426_ssl5103-sacB GTGGAGTTGATGAAGGATGACCGTT… hypothetical protein
3427_sll5104-sacB TTGACCGAAAATATGATCGTTATCT… arsenate reductase
3428_slr5105-sacB ATGATTATTACCGTTGCCAGTTTTA… plasmid partitioning protein
3429_ssr5106-sacB ATGAGCAAATTTAAAGGGATTTTGG… hypothetical protein
3430_sll5107-sacB ATGGTTGATATTTGTTGGGAGCAGT… cytidine deaminase
3431_ssl5108-sacB GTGAGGAGTTCTAGCCATGGAAAGC… DNA cytosine methyltransferase
3432_sll5109-sacB ATGACTCAATTCTACAAGCTAACCA… hypothetical protein
3433_slr5110-sacB ATGCTCTTGAGGGAGCAACCTTTTA… XRE family transcriptional regulator
3434_slr5111-sacB GTGCAAATAAACTACTACACTGCAA… hypothetical protein
3435_slr5112-sacB TTGATTGTACAGGTTACTTCTGGTT… hypothetical protein
3436_ssl5113-sacB ATGTCCACTGTTACCGAGTCAGACC… hypothetical protein
3437_ssl5114-sacB ATGGCAACCGTTACTGATACAGACC… hypothetical protein
3438_slr5115-sacB ATGTTGCAGATAACTAAAAGCCTCA… aminoacyl-tRNA hydrolase
3439_slr5116-sacB GTGAATAACCGAATTGTCATTGACA… putative toxin-antitoxin system toxin component%2C PIN family
3440_ssr5117-sacB ATGGGTACTTTAACGATACGGATGC… toxin-antitoxin system HicB family antitoxin
3441_slr5118-sacB ATGTTTGACAATCTCTGCAAATTCC… Rpn family recombination-promoting nuclease/putative transposase
3442_slr5119-sacB ATGTTTGACAATCTGTGCAAATTTC… Rpn family recombination-promoting nuclease/putative transposase
3443_ssr5120-sacB GTGCCACTAAATATAGACCCCACAG… no conserved domains
3444_ssr5121-sacB ATGCTCAAATTTATAGGCATTGCAT… hypothetical protein
3445_sll5122-sacB ATGAACAGTATTGCCCTGGTGGATT… hypothetical protein
3446_sll5123-sacB ATGCCTGCCAACGTGCTACCAGAAA… translesion error-prone DNA polymerase V autoproteolytic subunit
3447_slr5124-sacB ATGTTTGACAATCTCTGCAAATTCC… Rpn family recombination-promoting nuclease/putative transposase
3448_ssl5125-sacB ATGGGAAAAGCAGTTGCCTTTGGCA… hypothetical protein
3449_slr5126-sacB ATGAAAAAATTACTATTATTGTTAA… hypothetical protein
3450_slr5127-sacB ATGAGAAAAATCTCAATTAACAGAT… hypothetical protein
3451_sll5128-sacB ATGACGACTCAATCTCTCACTGCTG… hypothetical protein
3452_ssl5129-sacB ATGACAGGATTATGGTTGCATATGA… hypothetical protein
3453_sll5130-sacB GTGCGATTCAACGATTCTGAGATTG… HNH endonuclease
3454_sll5131-sacB ATGATATCAAATTTTGGACATATTG… transposase
3455_slr6110-sacB EAL domain-containing protein
3456_slr6001-sacB PAS domain S-box protein
3457_ssr6002-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
3458_ssr6003-sacB ATGTCCATCGCTGGAAAGTCCAAAG… no conserved domains
3459_slr6004-sacB ATGGCCGATTATCCCAAACCAGGAC… no conserved domains
3460_slr6005-sacB ATGGATGGGCTACTCCATTCCCTTT… ATP-binding protein
3461_slr6006-sacB ATGCTCACCATTACCCATCTATTAG… metal-dependent hydrolase
3462_slr6007-sacB ATGTTTGCCTCCAATCCAAAACCTA… DUF853 family protein
3463_slr6008-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3464_slr6009-sacB ATGGAAGACCCCCAGGGACAATCTA… hypothetical protein
3465_sll6010-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3466_slr6011-sacB ATGATTACTGCTTGCAGTCAGGAGC… thermonuclease family protein
3467_slr6012-sacB ATGGACAGCCCCCGGCAATTGTCAT… hypothetical protein
3468_slr6013-sacB ATGGAAGGGGATGTTGTACAGCTAA… DUF2357 domain-containing protein
3469_slr6014-sacB ATGAGTTTACCAACTGAATTGATTG… hypothetical protein
3470_slr6015-sacB ATGAAAATTATTGTTAAATTACAAG… hypothetical protein
3471_slr6016-sacB ATGACCAGACTCTTTAACCTAGAAT… hypothetical protein
3472_sll6017-sacB ATGTTCGATAATCTGTGCAAATTTC… Rpn family recombination-promoting nuclease/putative transposase
3473_ssl6018-sacB ATGCTCAAATTTATAGGTATTGCAT… hypothetical protein
3474_ssr6019-sacB GTGGTTCCCGGCACTTTATGGTCGT… no conserved domains
3475_ssr6020-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3476_slr6021-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3477_slr6022-sacB GTGGTTGCCCCTGCGGGGCATTTTT… hypothetical protein
3478_ssl6023-sacB ATGAGTGGCCGAGGTCGTCCTGGTG… hypothetical protein
3479_ssr6024-sacB ATGACTATTCAAGAAGCCAAAGAGA… hypothetical protein
3480_slr6025-sacB ATGTTGAGCCCTGAAATTTACGTTG… antirestriction protein ardA
3481_ssr6026-sacB ATGCACCACGACACCAAAGAAGCGA… hypothetical protein
3482_ssr6027-sacB ATGTATTTTGACCGTTTCGACATTG… hypothetical protein
3483_slr6028-sacB ATGACAACCACCACTAAAACCACCG… siphovirus Gp157 family protein
3484_slr6029-sacB ATGCTCCTAGCCGAAATTCTCGAAA… hypothetical protein
3485_ssr6030-sacB ATGGGACTTTTAAGTTATGGTCTTG… hypothetical protein
3486_slr6031-sacB ATGAAGCATTATAAAACTTCACACG… hypothetical protein
3487_ssr6032-sacB ATGAAAAGGAGTTTTAGCCATGGAA… DNA cytosine methyltransferase
3488_slr6033-sacB ATGGAACCCTTAAACACCTCGACCT… hypothetical protein
3489_slr6034-sacB ATGGTTGATATTTGTTGGGAGCAGT… cytidine deaminase
3490_ssl6035-sacB ATGAGCAAATTTAAAGGGATTTTGG… hypothetical protein
3491_sll6036-sacB ATGATTATTACCGTTGCCAGTTTTA… ParA family chromosome partitioning protein parA
3492_slr6037-sacB ATGATCGTTATCTACCACAATCCCG… arsenate reductase
3493_slr6038-sacB GTGGAGTTGATGAAGGATGACCGTT… Predicted restriction endonuclease, HNH family
3494_slr6039-sacB GTGGGTAATCAATTCTGGATATATG… DUF305 domain-containing protein
3495_slr6040-sacB ATGAGATTGTTGCTGGTGGAGGATG… two-component response regulator
3496_slr6041-sacB ATGCAGAACAATAGATTATTCAATC… two-component sensor histidine kinase
3497_slr6042-sacB ATGCAAAACCGGATCATTGTTCAGG… efflux RND transporter periplasmic adaptor subunit
3498_slr6043-sacB ATGCTTAATGCCATCCTCAAATGGT… CusA/CzcA family heavy metal efflux RND transporter
3499_slr6044-sacB ATGAAGTTCTCAATCCCCACCAATC… hypothetical protein
3500_slr6045-sacB ATGCTCTTAACCAGTATGGATCAAA… hypothetical protein
3501_ssr6046-sacB ATGGAAAGTAGGCGATTATCTATCC… hypothetical protein
3502_slr6047-sacB ATGTCTTCAATCTATGACAATTGTG… helicase
3503_ssr6048-sacB ATGACAATAACAACACAAGCTCAAA… hypothetical protein
3504_slr6049-sacB GTGAGGATGATTAAAGTTTTGGTAG… PIN domain-containing protein
3505_slr6050-sacB ATGAAATTGAACCGTACAAGTACCC… hypothetical protein
3506_slr6051-sacB ATGAAAAGAGATATGGAATTAATCA… DUF2513 domain-containing protein
3507_sll6052-sacB ATGTTGAACCGTTTTTGGGTATGGT… hypothetical protein
3508_sll6053-sacB ATGAACAATCAAATTAGTTTGACTC… hypothetical protein
3509_sll6054-sacB GTGATGACTTTTTTACCTGAGAGCG… hypothetical protein
3510_sll6055-sacB GTGGTGGTAAATGCACAGCAATTCA… hypothetical protein
3511_slr6056-sacB ATGAAAAAAGTAGGATTTGATATCA… helix-turn-helix domain-containing protein
3512_slr6057-sacB ATGGCAAGACGAAAGCAACCAAAAT… ImmA/IrrE family metallo-endopeptidase
3513_slr6058-sacB ATGAGACGTTATCGTTATCGATCGC… CAP domain-containing protein
3514_sll6059-sacB ATGAAAATTAACCGTCAGGGGCAGG… site-specific integrase
3515_sll6060-sacB ATGACAGGACAAGAAATTTTGATAA… N-acetyltransferase
3516_ssl6061-sacB ATGGGCGGACATCCACAAGGAAAGT… hypothetical protein
3517_ssr6062-sacB ATGGATTTTAATCCCAATGAGTGGC… hypothetical protein
3518_slr6063-sacB ATGTCCATCGCTGGAAAATCCAAAG… hypothetical protein
3519_slr6064-sacB ATGGATGGGCTACTCCATTCCCTTT… ATP-binding protein
3520_slr6065-sacB ATGCTCACCATTACCCATCTATTAG… metal-dependent hydrolase
3521_slr6066-sacB ATGTTTGCCTCCAATCCAAAACCTA… DUF853 family protein
3522_slr6067-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3523_slr6068-sacB ATGGAAGACCCCCAGGGACAATCTA… hypothetical protein
3524_sll6069-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3525_slr6070-sacB ATGATTACTGCTTGCAGTCAGGAGC… thermonuclease family protein
3526_slr6071-sacB ATGGACAGCCCCCGGCAATTGTCAT… hypothetical protein
3527_slr6072-sacB ATGGAAGGGGATGTTGTACAGCTAA… DUF2357 domain-containing protein
3528_slr6073-sacB ATGAGTTTACCAACTGAATTGATTG… hypothetical protein
3529_slr6074-sacB ATGAAAATTATTGTTAAATTACAAG… hypothetical protein
3530_slr6075-sacB ATGACCAGACTCTTTAACCTAGAAT… hypothetical protein
3531_sll6076-sacB ATGTTCGATAATCTGTGCAAATTTC… Rpn family recombination-promoting nuclease/putative transposase
3532_ssl6077-sacB ATGCTCAAATTTATAGGTATTGCAT… hypothetical protein
3533_ssr6078-sacB GTGGTTCCCGGCACTTTATGGTCGT… nothing
3534_ssr6079-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3535_slr6080-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3536_slr6081-sacB GTGGTTGCCCCTGCGGGGCATTTTT… hypothetical protein
3537_ssl6082-sacB ATGAGTGGCCGAGGTCGTCCTGGTG… hypothetical protein
3538_ssr6083-sacB ATGACTATTCAAGAAGCCAAAGAGA… hypothetical protein
3539_slr6084-sacB ATGTTGAGCCCTGAAATTTACGTTG… antirestriction protein
3540_ssr6085-sacB ATGCACCACGACACCAAAGAAGCGA… hypothetical protein
3541_ssr6086-sacB ATGTATTTTGACCGTTTCGACATTG… hypothetical protein
3542_slr6087-sacB ATGACAACCACCACTAAAACCACCG… siphovirus Gp157 family protein
3543_slr6088-sacB ATGCTCCTAGCCGAAATTCTCGAAA… hypothetical protein
3544_ssr6089-sacB ATGGGACTTTTAAGTTATGGTCTTG… hypothetical protein
3545_slr6090-sacB ATGAAGCATTATAAAACTTCACACG… hypothetical protein
3546_slr6091-sacB ATGGAAAACTTCGACACCTCGACCT… hypothetical protein
3547_ssl6092-sacB GTGAAATTTATGGCTAAGGAAAAAA… hypothetical protein
3548_sll6093-sacB ATGATTATCACCGTTACTGCTTTTA… ParA family chromosome partitioning protein
3549_slr6094-sacB ATGAAAGATAACCGTTATTCTCCTG… HNH nucleases
3550_slr6095-sacB ATGTTATTCCTTAAGCGAGCTTCAG… methyltransferase
3551_slr6096-sacB ATGCAATATTTTGATTTTTTGCCGG… Chromosome segregation ATPase
3552_slr6097-sacB ATGTCTAATAATTGGAATATATTAA… type Ii site-specific deoxyribonuclease subunit S
3553_sll6098-sacB ATGGCGATCGCCAGCCGAGCAGGTC… Fic family protein
3554_ssr6099-sacB ATGGATTTAGATGCACGGTTTGAGT… hypothetical protein
3555_slr6100-sacB ATGCACATCATCTCGAAAACTGCCC… type II toxin-antitoxin system HigB family toxin
3556_slr6101-sacB ATGAGCTGCACATACTTAGAATTAA… transcriptional regulator
3557_slr6102-sacB GTGTCTAGGATTATGAAATCAAGCC… type I restriction-modification system R subunit
3558_slr6103-sacB ATGGTTAGTACGATGAACATCATTG… M48 family peptidase
3559_slr6104-sacB ATGAAAAATATTATTATCTCAAATT… hypothetical protein
3560_slr6105-sacB ATGATATCAAATTTTGGACATATTG… transposase
3561_slr6106-sacB GTGCGATTCAACGATTCTGGGTCAG… hypothetical protein
3562_slr6107-sacB ATGATTTTATTTCAGGGGAAAGATT… CAP domain-containing protein
3563_slr6108-sacB ATGCTTGACTTCTCAGCAATTTCTG… hypothetical protein
3564_sll6109-sacB ATGAAAATTAACCGTCAGGGGCAGG… site-specific integrase
3565_cpc-all-codA cpcBAC1C2D + promoter
3566_cpc-operon-codA cpcBAC1C2D
3567_ssr2849-sacB nblD
3568_ssl0105-sacB PII-interacting protein X pipX
3569_sml0013-sacB single transmembrane small subunit of the NDH-1 complex ndhP
3570_ssl2163-sacB ndhQ
3571_slr0743a-sacB YlxR family protein
3572_sll1749a-sacB hypothetical protein