Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Sort descending Gene ID
3062_sll1549-sacB ATGAAATGGGCTAACCGGTTGCTAT… histidine phosphatase family protein
2408_sll0395-sacB ATGACCCTCAATCTCTACTTTTTGC… histidine phosphatase family protein
0502_slr1848-sacB GTGACTCGTATTCTTAAGCTCTCGC… histidinol dehydrogenase hisD
0385_slr0682-sacB ATGTTACGTCTCATCACCCAGTCCG… histidinol dehydrogenase hisD
1283_sll1958-sacB ATGGGAGAAGCTTTAAACAAAGGGA… histidinol phosphate aminotransferase hisC
0879_sll1713-sacB ATGGCAGGCTGTCCAGCTTTTTCTT… histidinol-phosphate aminotransferase hisC
2990_slr1560-sacB ATGATTCACCATCCCCCCGCTGGGG… histidyl tRNA synthetase hisS
2205_slr0357-sacB ATGGGAGCTATCCAAGCCATTCGTG… histidyl-tRNA synthetase hisS
1687_sll1180-sacB ATGAGTCTGACCATTGCCGATTATC… HlyB family hlyB
1931_sll0260-sacB ATGTTTTCCTCTTCTGTTGAGCTGG… HlyC/CorC family transporter, hemolysin
0810_slr1207-sacB GTGCCCATGGCCATGCCCCTTGTCC… HlyD family efflux transporter periplasmic adaptor subunit
1686_sll1181-sacB ATGAATAGCCCCACCCAGGAACATG… HlyD family of secretion proteins hlyD
3244_slr7076-sacB ATGTCGCTGGACACGCTGGTGCCGG… HNH endonuclease
1391_slr2080-sacB ATGCCAATCAGTGAAGATCTCAAAC… HNH endonuclease
1140_sll2007-sacB ATGAGTAAGAGCTATATTTCCCCAT… HNH endonuclease
3314_sll8040-sacB ATGGAAATACTTACACGGTACAACT… HNH endonuclease
3350_ssl5027-sacB ATGAAGAATAATCGTTATTCTCCTG… HNH endonuclease
3225_slr7057-sacB ATGACAAGGACTCTGCCACCTGTGT… HNH endonuclease
3387_ssl5064-sacB ATGAAAGATAACCGGTATTCTCCTG… HNH endonuclease
0270_sll1193-sacB ATGGCTAAGGTTTTAGTCCTCAACG… HNH endonuclease
3453_sll5130-sacB GTGCGATTCAACGATTCTGAGATTG… HNH endonuclease
3422_ssl5099-sacB ATGAAAGGTGATCATTATTCTCCTA… HNH endonuclease
1943_slr0393-sacB ATGAATGAAGATTTAGATAATGACT… HNH endonuclease< DUF433 domain-containing protein
3549_slr6094-sacB ATGAAAGATAACCGTTATTCTCCTG… HNH nucleases
2892_sll0896-sacB ATGGATCAAACTGAAGCGGCCCAAC… Holliday juction resolvase; RuvC
1016_sll0876-sacB ATGATTCAATTTCTTCAGGGCCAGG… Holliday junction DNA helicase; RuvA ruvA
2382_sll0613-sacB ATGGCCATTAAACGTTCCGGCAACA… Holliday junction DNA helicase; RuvB ruvB
3070_sll1547-sacB ATGAGCAAAAAAGTAGCGGCCCTGG… Holliday junction resolvase ruvX
3127_slr1189-sacB GTGGGAGGAACAACAGGCGGTGGAA… homocysteine S-methyltransferase
1196_slr1736-sacB ATGGCAACTATCCAAGCTTTTTGGC… homogentisate phytyltransferase
2357_sll0455-sacB GTGACAGTTAAAATTGGTTTACTCG… homoserine dehydrogenase thrA
1113_sll1760-sacB ATGGTCAGCTTTACCGTTTCTGTGC… homoserine kinase thrB
2726_slr0789-sacB ATGGTTGACTACAGGAAAGCCCGAT… HPP family protein
0418_sll1514-sacB ATGTCTCTCATTCTTTACAATCCCC… Hsp20/alpha crystallin family protein hsp17
1396_sll1988-sacB ATGGCAGACCAATTGATCCGCGCCA… Hsp33 family molecular chaperone HslO hslO
2592_slr0086-sacB GTGCCCTACGCCATTGATTTTGGTA… Hsp70 family protein
2833_sll0030-sacB ATGAAAAATGCCACCCTCCACCAAT… HTH-type transcriptional activator cmpR
0577_ssr1698-sacB ATGGCTGATCCCCTCACCCCTGCTA… HugZ family protein
0420_sll1512-sacB ATGGAAAAGGTTTTCCCTCATACTG… HxlR family transcriptional regulator
2816_sll0043-sacB ATGCTCAACTCCGACATTCGTGACC… hybrid sensor histidine kinase/response regulator
1507_sll1229-sacB ATGGGCCCGGACTGTAAAACCCTTT… hybrid sensory kinase hik41
1508_sll1228-sacB GTGCGTTTTGCCATAGAGCAACTGG… hybrid sensory kinase hik4
1414_slr2098-sacB ATGTTTTGGCAACCTGTTAGTCCCC… hybrid sensory kinase hik21
0375_slr1400-sacB ATGGGAACAGCTTCCCTTCTGGTGG… hybrid sensory kinase hik38
1415_slr2099-sacB ATGGATACAGCAACAACCAAGGGCA… hybrid sensory kinase
1420_slr2104-sacB ATGAAGTCTTTTTTCCTCAACACAT… hybrid sensory kinase rre22
0478_slr1759-sacB ATGGTTATTAGTGCCACTGTGATAT… hybrid sensory kinase hik14
0228_sll1672-sacB ATGCAAATCAATAACCATGTTTTCA… hybrid sensory kinase
1804_sll1555-sacB ATGCCCAAAATTTTGATAATTGAAG… hybrid sensory kinase
1619_slr1969-sacB ATGCTACCCGCTTTTTCCCCCATTT… hybrid sensory kinase
1307_sll1905-sacB ATGTCCCCATCCCAGCCCCACCCAC… hybrid sensory kinase hik19
1497_slr1324-sacB GTGGAAGTAGAATACAGTGGAGTGT… hybrid sensory kinase
2254_slr0222-codA ATGCCTATCATTCCTAGCCCCAAAG… hybrid sensory kinase
1138_slr2135-sacB ATGCTAGGGTTGGGGACTAAGTTTA… hydrogenase accessory protein hupE
0718_sll1079-sacB ATGCACCAATCCATTGACACGGCGA… hydrogenase accessory protein HypB hypB
1799_ssl3044-sacB GTGACCATTACCTTTGTTAAAGAGC… hydrogenase component
1779_slr1675-sacB ATGCACGAAGTTAGTCTGATGGAGC… hydrogenase expression/formation protein; HypA hypA
1602_ssl3580-sacB ATGTGTCTAGCCCTACCTGGCCAGG… hydrogenase expression/formation protein; HypC hypC
0900_sll1462-sacB GTGAACTTAGTCTGTCCCGTTCCCC… hydrogenase expression/formation protein; HypE hypE
1734_sll1432-sacB ATGTGCCAAAACTGCGGTTGTAGTG… hydrogenase isoenzymes formation protein; HypB hypB
0044_slr1498-sacB ATGAAATACGTTGATGAATATCGGG… hydrogenase isoenzymes formation protein; HypD hypD
1513_sll1226-sacB ATGTCTAAAACCATTGTTATCGATC… hydrogenase large subunit hoxH
0719_sll1078-sacB ATGCATGAAACAGACATGACCAAAG… hydrogenase maturation nickel metallochaperone HypA hypA2
1102_slr1876-sacB ATGCCAGGCCAATCCACCAAGTCCA… hydrogenase maturation protease
1516_sll1224-sacB ATGGCTAAAATTCGTTTTGCTACCG… hydrogenase small subunit hoxY
1517_sll1223-sacB ATGTCTGTTGTTACTTTAACCATTG… hydrogenase subunit hoxU
1519_sll1221-sacB ATGGACATTAAAGAATTAAAGGAAA… hydrogenase subunit hoxF
1803_sll1556-sacB ATGGATAGCACCCCCCACCGTAAGT… Hydroxyacid reductase
2271_sll0191-sacB ATGAACAGGGGAGCAAAAGTAAAGA… hydroxylase
3396_slr5073-sacB ATGATTGTTGAACGGTGCTATTTTC… hypothetical protein
3270_slr7102-sacB ATGAAAAAATTACTCAAATCGCTCA… hypothetical protein
3018_sll1476-sacB ATGGGGAAAGGCAAAGCCGATCCAG… hypothetical protein
3082_ssr2786-sacB ATGCGCCTATTTATTTTTTCCCTTA… hypothetical protein
2766_sll0678-sacB ATGGATTACAGTCATCGTATTGTTA… hypothetical protein
2388_slr0637-sacB ATGACTGGAAAAGTTGCCGAAAGTG… hypothetical protein
2010_sll1863-sacB ATGAGGATAACCTTTATGTCTAACC… hypothetical protein
1948_sll0361-sacB ATGCCAATGTCCCCATCAGTAAGAT… hypothetical protein
1696_slr1273-sacB ATGTTTTTAACTGCTCTGCGGTCTT… hypothetical protein
1380_slr0273-sacB ATGCCCAAAAATATGTCACCAATCT… hypothetical protein
1066_sll1785-sacB ATGCTATTGAAAGTCAAACTTTGGG… hypothetical protein
0940_ssr2047-sacB ATGTCCATAATGTTGCAAGACCCCC… hypothetical protein
0814_slr1210-sacB ATGATTAAATTCTATAGCAACGAAA… hypothetical protein
0436_ssl2920-sacB ATGCTAAAAACATCAGAATTTCAAA… hypothetical protein
0058_slr1119-sacB ATGCAAACGATTTCCCCTGCGTCGA… hypothetical protein
3490_ssl6035-sacB ATGAGCAAATTTAAAGGGATTTTGG… hypothetical protein
3554_ssr6099-sacB ATGGATTTAGATGCACGGTTTGAGT… hypothetical protein
3238_sll7070-sacB ATGGAAAACCCTAATCAATACCAAA… hypothetical protein
2420_ssl0750-sacB GTGATGTTGTTTGCGTTTTTCCAGC… hypothetical protein
1790_sll1562-sacB ATGGCTTCCGTACCATTTACAGACA… hypothetical protein
0908_slr1552-sacB ATGTGGCGTTATCGGTCACCCGAAA… hypothetical protein
0656_slr1704-sacB ATGTTTAATAGTTTTTCGTTCCCTA… hypothetical protein
0342_slr1068-sacB ATGAAAACAACTATTAACGACTACA… hypothetical protein
3522_slr6067-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3523_slr6068-sacB ATGGAAGACCCCCAGGGACAATCTA… hypothetical protein
3397_ssr5074-sacB ATGTTTAAATTTATAGGCATTGTAT… hypothetical protein
3145_slr0592-sacB ATGGCGATCGCCACAATCTTTGCCC… hypothetical protein
2831_slr0038-sacB ATGTCTAGCACTGCCATTAGCCAGC… hypothetical protein
2641_sll0595-sacB ATGGTCTGGGCAAACCTTGGGCACT… hypothetical protein
2579_sll0085-sacB ATGAACTCTGACCATTCTCGGGATC… hypothetical protein
2011_sll1862-sacB ATGGGGTCATTGCAAGGAAATTACT… hypothetical protein
2075_slr0337-codA ATGGCCCACCCGTTGTATGTCGCTT… hypothetical protein
1003_sll1273-sacB ATGAAATTATCCGATAAAGGTCTTA… hypothetical protein
1067_sll1784-sacB ATGAAAACTTTACGTTTATCCCCAT… hypothetical protein
0689_sll1921-sacB ATGGCTCAATCCCCCTGTTCCCGAT… hypothetical protein
0059_sll1062-sacB ATGTCTAAATTTAGCAAATTACTAG… hypothetical protein
3429_ssr5106-sacB ATGAGCAAATTTAAAGGGATTTTGG… hypothetical protein
2547_ssr1407-sacB GTGCAACAGCTTGCCGGTGTGACCG… hypothetical protein
2421_ssr0693-sacB ATGAAGGTATTACATTTGGCGCTGA… hypothetical protein
2107_sll0156-sacB GTGAAGATCATGGGCAGGGCAAATT… hypothetical protein
1855_slr1624-sacB GTGCTCGATCGCCATTGGCATAATC… hypothetical protein rre18
1161_slr1809-sacB ATGGCATTGGTCCACAGCGGAGTAA… hypothetical protein
0909_sll1455-sacB ATGTTTTTTCAATTTGAAGCTGATT… hypothetical protein
0847_sll1739-sacB ATGAAATTTAACACGGAATGCTTAC… hypothetical protein
3524_sll6069-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3336_slr5013-sacB GTGACTACACTCAGCCAATATTTTC… hypothetical protein
2138_sll0328-sacB ATGCCCAAACCAGATCCATTCCAGA… hypothetical protein
2076_sll0294-codA ATGCTTGATATCACCAAGTTAGCTG… hypothetical protein
1382_sll0242-sacB ATGGACTTTGTCGAAGCCGAGCAAA… hypothetical protein
1446_ssr2549-sacB ATGCCAGACTTCCAGGCATTTATCG… hypothetical protein
1320_sll1613-sacB ATGGCAGTGGCCAATACTAACTCCC… hypothetical protein
1130_sll2015-sacB ATGGCCACCACCGCCGATGACGTCT… hypothetical protein
0878_sll1714-sacB ATGCTCAGAGAATTAAGAACAAACA… hypothetical protein
0438_sll1504-sacB ATGGAAACAACAAATTTACCGATGG… hypothetical protein
0060_sll1061-sacB ATGGATCGAATAGAACAAAAAGTTA… hypothetical protein
0124_slr0240-sacB ATGAGCTGGATTCCCCCCTACCGTC… hypothetical protein
2926_slr1425-sacB ATGCCTAATCCAGCCATAGGCCTCG… hypothetical protein
2108_slr0184-sacB ATGCCTAGAATTTCAATTATTCGGC… hypothetical protein
1792_slr1681-sacB ATGTCGGTTAAATTAGCGGTTCTAA… hypothetical protein
0974_slr1441-sacB GTGGAATCCCAGGTGCGGCCGGCGG… hypothetical protein
0848_sll1738-sacB ATGTCTGATAGTCGTTTAAATCTGG… hypothetical protein
0658_sll1574-sacB ATGACCCCTGACTCCCGTCACCGCC… hypothetical protein
0028_slr1485-sacB ATGTTTAAATTTGCTCAAATTATTT… hypothetical protein
0092_slr0723-sacB ATGTATAAAGCCATTGCCGATGCCA… hypothetical protein
3463_slr6008-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3337_sll5014-sacB ATGAGTCAAATATTTCAATGTCCTT… hypothetical protein
3211_sll7043-sacB ATGCCTAAAAAACTATCAGTTCCTG… hypothetical protein
2707_sll0283-sacB ATGTTTAATTCCATTCGTCGGCTAT… hypothetical protein
2139_sll0327-sacB ATGGATAACAAAAACGAGAATCAAG… hypothetical protein
2077_sll0293-sacB ATGCCGAATATTCGTCCTCTGACCG… hypothetical protein
1069_slr1852-sacB ATGTCATCAAGAAAAAATTACTACT… hypothetical protein
0439_sll1503-sacB ATGAAGTTTGCAACCTATGAGCATT… hypothetical protein
0313_slr0975-sacB GTGGAGGAAACGGTCTTGGACGAAC… hypothetical protein
3367_sll5044-sacB ATGATCCAAGAGTTTCAGCGGTTTA… hypothetical protein
3241_slr7073-sacB ATGCCTAACCCCACCGTTGAAATTA… hypothetical protein
2359_slr0496-sacB ATGGAAAATCCCCTGCAAAAAGTGG… hypothetical protein
1919_sll0269-sacB ATGACCGAACCCCTTTTCTGGCTGG… hypothetical protein
1605_slr1959-sacB ATGGATAAACCCAGTTCCTTTTTCG… hypothetical protein
1163_sll1698-sacB ATGCTCATGGACTGGATTCCTTTCG… hypothetical protein
1037_slr0887-sacB ATGTTGTACTGGTGGGATGGACAAT… hypothetical protein
0659_sll1573-sacB ATGGTGACCAAGTTTAGTTTTCCTG… hypothetical protein
0407_slr0695-sacB ATGAGAAAAAGACTCACCCGTTTCC… hypothetical protein
3526_slr6071-sacB ATGGACAGCCCCCGGCAATTGTCAT… hypothetical protein
3464_slr6009-sacB ATGGAAGACCCCCAGGGACAATCTA… hypothetical protein
3338_ssl5015-sacB ATGAGTGATTTCCCAAAAGACTGGG… hypothetical protein
3212_sll7044-sacB GTGAAGATAGTCGTATTTAACGGCA… hypothetical protein
2960_sll0630-sacB ATGGGTTACTGCCGTTTTTTACCAA… hypothetical protein
2518_sll0547-sacB ATGGTCAGCAGCCAAAAGCCCATCG… hypothetical protein
1952_slr0398-sacB ATGACTACAATAATGGTCAACCTGG… hypothetical protein
1826_sll0914-sacB ATGCCCGCCCCCAAAATTATTAAAA… hypothetical protein
1636_slr1977-sacB ATGATTTCAGCCGACCTCAATCCCC… hypothetical protein
0628_slr1391-sacB ATGTCCGATCCTCGTACAATCTATT… hypothetical protein
0566_sll1832-sacB ATGTCTGCCTTACCCAAACCGGCCT… hypothetical protein
0250_slr1799-sacB ATGAATAAGACCTTTAACCTCCCTA… hypothetical protein
0314_sll0924-sacB ATGCCCGCCGGTAAAATCCATGACC… hypothetical protein
0062_ssl2069-sacB ATGAAAACTTTATTACTAACCTGGC… hypothetical protein
3432_sll5109-sacB ATGACTCAATTCTACAAGCTAACCA… hypothetical protein
3242_ssl7074-sacB GTGTGCCAGGAAAACCCAGGTCATT… hypothetical protein
3306_sll8032-sacB ATGAGTAACCTTATTCTGCAAATCA… hypothetical protein
3054_sll0722-sacB ATGATCAGAACTAAATTGGTTGAGT… hypothetical protein
2424_slr0420-sacB GTGACCCCCGGTGGCTTGATCTTCT… hypothetical protein
1290_sll1954-sacB ATGACCAATTTCCCCCCTTTACTAA… hypothetical protein
1038_slr0888-sacB ATGAACCGTACCGCTAAATTAACCG… hypothetical protein
0976_slr1442-sacB ATGCTGACTGTCCACCGTGATGCCC… hypothetical protein
0408_slr1590-sacB GTGAGTAAGCCAATCTTTAAGTTAG… hypothetical protein
0282_sll1188-sacB ATGAAAAAAGAAATTAATTATTGGG… hypothetical protein
0095_slr0727-sacB ATGATGACTGACTATCCTACCAATT… hypothetical protein
3401_slr5078-sacB ATGAAATTTTCCTTTCCTTGGCACT… hypothetical protein
3465_sll6010-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3339_slr5016-sacB ATGGGAAAAGCAGGACAAGCATTAA… hypothetical protein
3213_ssl7045-sacB GTGGCTGCTAAACTCTCTTGCGCTG… hypothetical protein
3023_sll1472-sacB ATGTTGAAACTAGCCGGTAAAAAAG… hypothetical protein
3087_sll0449-sacB ATGGCTGGCAATCAACCGGATAAAT… hypothetical protein
2709_sll0282-sacB GTGCAAAAAAATCTGATGGCAATGC… hypothetical protein
2457_sll0181-sacB ATGAATATAAATAAAGGCAAAGTAA… hypothetical protein
2331_slr0069-sacB ATGACTTCCCCACCAACTCCAGACC… hypothetical protein
2015_sll1858-sacB ATGTCTAGTTCCCGTGGCCCCTATA… hypothetical protein
2079_slr0168-sacB ATGACTATTCAATACACCCCCCTAG… hypothetical protein
1637_slr1978-sacB ATGGACTTGATGCGGTCTTTACCCA… hypothetical protein
1575_slr1339-sacB ATGCTATTGAGGATTGAAACCAGAT… hypothetical protein
1197_slr1737-sacB ATGAAATTTCCGCCCCACAGTGGTT… hypothetical protein
0819_slr1215-sacB GTGGTCTTAAACCGTTTAGCGTTGG… hypothetical protein
0441_ssr2708-sacB ATGAGCGTAGCCCTAGATCGGCAAA… hypothetical protein
3559_slr6104-sacB ATGAAAAATATTATTATCTCAAATT… hypothetical protein
3243_sll7075-sacB ATGAGCATTTTACGATACGAAGAAA… hypothetical protein
3307_sll8033-sacB ATGCGAGCCTTACCTTCTTTCCCCA… hypothetical protein
2551_ssl1552-sacB ATGGTTTTCCCTTCCCCCAATGGTG… hypothetical protein
2235_sll0008-sacB ATGGTGTCAATATTTCATCAATTGG… hypothetical protein
1607_ssl3573-sacB GTGATTGTTGATCAACCTAATGGCG… hypothetical protein
0535_ssr3467-sacB GTGGCTATTCTCGTTCCTTCCGCTC… hypothetical protein
0599_sll0983-sacB GTGCCCCGCCAGGCGATCGCCAATG… hypothetical protein