Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Gene ID Sort ascending
2987_sll1496-sacB ATGCGAGCTGTGTTGATGGCAGGGG… mannose-1-phosphate guanyltransferase
2861_sll0505-sacB ATGTCGGGCTTTCCCCCGGATCTTA… TIGR00159 family protein
2925_slr1424-sacB ATGATTATTTCCCCCGCTACCCGTC… UDP-N-acetylenolpyruvoylglucosamine reductase
2735_slr0797-sacB ATGGTTGTAACTCCCCCTTCTTCTG… cation-transporting ATPase; E1-E2 ATPase
2547_ssr1407-sacB GTGCAACAGCTTGCCGGTGTGACCG… hypothetical protein
0049_slr1501-sacB GTGATGTCAACCACGCTAAATACCC… GNAT family N-acetyltransferase
2421_ssr0693-sacB ATGAAGGTATTACATTTGGCGCTGA… hypothetical protein
0113_slr0740-sacB ATGCTGGGAAATTTTCAACATAGCC… hypothetical protein
2043_slr0990-codA GTGCAATTGACTAAAGGGTTAGAAG… glutamate--cysteine ligase
2107_sll0156-sacB GTGAAGATCATGGGCAGGGCAAATT… hypothetical protein
1917_slr0280-sacB ATGGCCCTAGGGGATTTGCTGAAAA… phosphodiester glycosidase family protein
1665_slr1470-sacB ATGGGCATTCGAGAAACCACTTATT… PH domain-containing protein
1729_sll1437-sacB ATGTTAAGAGAACTAATTAAGCTCT… transposase
1539_sll0815-sacB ATGGCACGACAAGCTCGCTATCAAA… slipin family protein
1477_slr2118-sacB GTGGACATGAAATATCCTAGGATTT… glycosyltransferase family 1 protein
1287_slr2059-sacB ATGAAGAAGCGTGTGACCCTGACTT… ferredoxin
1161_slr1809-sacB ATGGCATTGGTCCACAGCGGAGTAA… hypothetical protein
1035_sll0867-sacB GTGCCCAGGGGGCTTTGGGTTACCC… aldo/keto reductase
0909_sll1455-sacB ATGTTTTTTCAATTTGAAGCTGATT… hypothetical protein
0783_slr1903-sacB GTGGCATTTTCTCCAGGCAAAAAAA… transposase
0847_sll1739-sacB ATGAAATTTAACACGGAATGCTTAC… hypothetical protein
0657_sll1575-sacB GTGATTAAATACCGTCCCCTCAAAG… serine/threonine protein kinase
0721_slr1142-sacB ATGCAACAAGCGGCCATCCCAGCCA… GAF domain-containing protein
0595_sll0986-sacB ATGATAAGGCATATGAGCGTGTTAC… transposase
0469_ssl1922-sacB ATGGCGAACGCTCTATGGTTATTTT… transposase
0343_slr1069-sacB GTGGGCAATGAACAAAAAACAGTAT… FkbM family methyltransferase
3523_slr6068-sacB ATGGAAGACCCCCAGGGACAATCTA… hypothetical protein
3397_ssr5074-sacB ATGTTTAAATTTATAGGCATTGTAT… hypothetical protein
3461_slr6006-sacB ATGCTCACCATTACCCATCTATTAG… metal-dependent hydrolase
3271_sll7103-sacB ATGCAACTAAAAAATGATTATCATC… exodeoxyribonuclease V alpha chain
3335_slr5012-sacB ATGAAAGTTCAGCTTGGTCTTGATA… DUF4007 family protein
3145_slr0592-sacB ATGGCGATCGCCACAATCTTTGCCC… hypothetical protein
3019_slr1583-sacB GTGTTTACTCGACTTGCCCAGCAAC… DUF1815 family protein
3083_sll1542-sacB ATGAAAACAGACAAATGGTTTTACG… DUF2887 domain-containing protein
2957_slr0651-sacB ATGCTTGCCCTAATTGACACTGTTA… DUF4346 domain-containing protein
2767_sll0677-sacB ATGATAATTCGAGAATTTTACAGCA… transposase
2831_slr0038-sacB ATGTCTAGCACTGCCATTAGCCAGC… hypothetical protein
2641_sll0595-sacB ATGGTCTGGGCAAACCTTGGGCACT… hypothetical protein
2705_sll0286-sacB ATGGTTTTTTGGAAACGCTTTTTTA… GNAT family N-acetyltransferase
2579_sll0085-sacB ATGAACTCTGACCATTCTCGGGATC… hypothetical protein
0018_sll1204-sacB ATGAAGACCTTTGTCACTCTTTGCT… MFS transporter
2390_slr0639-sacB ATGGTGAATTTGTTGTTTCTTTTTT… mechanosensitive ion channel
2454_sll0183-sacB ATGAAAATTCGTCCCTTTCTTGTGG… tetratricopeptide repeat protein
2328_sll0055-sacB ATGACCCCCAGCCTATTGCCTCCCC… processing protease
2138_sll0328-sacB ATGCCCAAACCAGATCCATTCCAGA… hypothetical protein
2012_sll1861-sacB ATGATAATCCGAGAACTTTACAGCA… transposase
2076_sll0294-codA ATGCTTGATATCACCAAGTTAGCTG… hypothetical protein
1760_ssl2138-sacB ATGACTACTGAAGCTGCCCTATTAA… DUF2281 domain-containing protein
1824_slr0942-sacB GTGCAGAGTTTCAATAGGATAAATT… aldehyde reductase
1634_sll1879-sacB GTGAGTGAATCTCCCTTAACCATTG… DUF3685 domain-containing protein
1572_sll1257-sacB ATGTTAAGAGAACTAATTAAGCTCT… transposase
1382_sll0242-sacB ATGGACTTTGTCGAAGCCGAGCAAA… hypothetical protein
1446_ssr2549-sacB ATGCCAGACTTCCAGGCATTTATCG… hypothetical protein
1256_sll1156-sacB ATGTCTACACACTGTCACTGTCCTC… transposase
1320_sll1613-sacB ATGGCAGTGGCCAATACTAACTCCC… hypothetical protein
1130_sll2015-sacB ATGGCCACCACCGCCGATGACGTCT… hypothetical protein
1194_sll1624-sacB GTGAACCAAATTTCTCCCCTCCGTA… regulatory components of sensory transduction system
1004_sll1272-sacB ATGTCAGAGATTGAGGAATCAGCAA… DUF4393 domain-containing protein
1068_sll1783-sacB ATGAGAGCTGATTTTTTTCTGTCTG… antibiotic biosynthesis monooxygenase
0878_sll1714-sacB ATGCTCAGAGAATTAAGAACAAACA… hypothetical protein
0626_sll1289-sacB ATGGTTTTAACTCCCTCCACCATGC… thioredoxin family protein
0438_sll1504-sacB ATGGAAACAACAAATTTACCGATGG… hypothetical protein
3492_slr6037-sacB ATGATCGTTATCTACCACAATCCCG… arsenate reductase
3556_slr6101-sacB ATGAGCTGCACATACTTAGAATTAA… transcriptional regulator
3366_sll5043-sacB ATGGCCATAATTGCTTCAAACAATA… glycosyltransferase family 2 protein
3430_sll5107-sacB ATGGTTGATATTTGTTGGGAGCAGT… cytidine deaminase
3304_slr8030-sacB ATGGTCTGGTCACGTCGAAATTTTC… DUF839 domain-containing protein
3114_slr1178-sacB GTGTTGACCAGTATGAAAGGTTTGT… SH3 domain-containing protein
2988_sll1495-sacB ATGGCTTCCTATGACATCACAATTA… L-2-hydroxyglutarate oxidase
2926_slr1425-sacB ATGCCTAATCCAGCCATAGGCCTCG… hypothetical protein
2736_sll0793-sacB ATGATTCTGCGATCACTGCTTTATT… YnfA family protein
2800_slr0765-sacB ATGCCCTTAATTACCAAACTAAAAA… mechanosensitive ion channel family protein
2610_slr0503-sacB ATGGTAAATTTCGGGCTTAATTCAG… Ycf66-like protein
2358_slr0495-sacB GTGCTCCCCCAGCCCCAAATTTGGC… lipopeptide antibiotics iturin a biosynthesis protein
0050_slr1113-sacB GTGTCCCCCATGGAATTAACCCCTG… ABC transporter
0114_sll0696-sacB ATGCCAAAATCAACCGTTAATTTCA… CPBP family intramembrane metalloprotease
2296_slr0440-codA ATGGAAAAATACAACATCCAAGTTT… alpha/beta hydrolase
2108_slr0184-sacB ATGCCTAGAATTTCAATTATTCGGC… hypothetical protein
1792_slr1681-sacB ATGTCGGTTAAATTAGCGGTTCTAA… hypothetical protein
1730_sll1436-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
1540_sll0814-sacB ATGGAAAAACTAATGCGGATTGAGC… carotenoid biosynthesis protein
1604_sll1898-sacB GTGACTGGGGTTTTTCTCCCCCCCT… heme A synthase
1478_slr2119-sacB ATGAGTTTTTCTGAACATCATCTTG… FkbM family methyltransferase
1288_slr2060-sacB ATGGAATCCCCCATCCAAGCCCAAC… 1-acyl-sn-glycerol-3-phosphate acyltransferase
1162_sll1699-sacB ATGCGTTGGGGAAACAAAGTAGCAA… ABC transporter substrate-binding protein
1226_sll0846-sacB ATGAAATTTTCCCTCGAGTCTCTCT… DUF1232 domain-containing protein
0974_slr1441-sacB GTGGAATCCCAGGTGCGGCCGGCGG… hypothetical protein
0784_sll1792-sacB GTGAAAGGACGAAAGCGTCATCTAA… transposase
0848_sll1738-sacB ATGTCTGATAGTCGTTTAAATCTGG… hypothetical protein
0658_sll1574-sacB ATGACCCCTGACTCCCGTCACCGCC… hypothetical protein
0722_slr1143-sacB ATGGAAGCTAAATTACCGCAAAATG… diguanylate cyclase
0470_ssl1920-sacB ATGATACCGAGAGAATTTTACAGCA… transposase
0344_slr1070-sacB ATGGTGAATCAACAAGAAGAAATTA… glycosyltransferase family 2 protein
0154_sll0216-sacB ATGGCCACCTTTTATAATCTTCACC… S41 family peptidase
3524_sll6069-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3398_sll5075-sacB ATGAAAGAAGACTTTGGTTTTACAC… VOC family protein
3462_slr6007-sacB ATGTTTGCCTCCAATCCAAAACCTA… DUF853 family protein
3272_slr7104-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
3336_slr5013-sacB GTGACTACACTCAGCCAATATTTTC… hypothetical protein
3146_slr0593-sacB ATGGAACTGGGAAAGATTAGTCCAA… cAMP protein kinase regulatory chain
3210_ssl7042-sacB ATGGGCACTGCCACTAGATATACGG… DUF1819 family protein
3084_sll0451-sacB GTGGAAATTAATTGGTCTTGGCAAC… GNAT family N-acetyltransferase
2768_ssl1277-sacB ATGGAGCACTTCAGCAAGGGATTTT… transposase
2832_slr0039-sacB GTGGCCAATTCACCCCAATGTTTAT… phosphotransacetylase family protein
2642_sll0594-sacB ATGTTTGTGAACAGTTCCCCGATCG… transcriptional regulatory protein
2706_sll0284-sacB ATGTCAGACCATGCCCTCGGCTCCG… ATP-binding protein
2516_sll0549-sacB GTGGGAAAAGGGTGGGATGTATTTA… PHP domain-containing protein
2707_sll0283-sacB ATGTTTAATTCCATTCGTCGGCTAT… hypothetical protein
2517_slr0569-sacB ATGGAGTCGGCCACCATGTCTTTTC… DUF2779 domain-containing protein
0019_sll1203-sacB ATGATTAATTGTCAATTTTGTTCCG… sucrase ferredoxin
2391_slr0640-sacB ATGTTTCAGGCCACCCGTCGACGTT… sensory transduction histidine kinase
2329_slr0067-sacB ATGCTAACCACCGATGCCGTTTTAA… put. ATPase
2139_sll0327-sacB ATGGATAACAAAAACGAGAATCAAG… hypothetical protein
2203_slr0356-sacB ATGACTAGACCAATTTCCCTGGGCT… DUF2808 domain-containing protein
2013_sll1860-sacB ATGATAATTCGAGAATTTTACAGCA… transposase
2077_sll0293-sacB ATGCCGAATATTCGTCCTCTGACCG… hypothetical protein
1887_slr1648-sacB ATGACCGCTACCCTCTCCCGGGCCG… carotenoid oxygenase family protein
1951_slr0397-sacB ATGGTTCTCACCCAGTTCGCCTCCA… DUF3038 domain-containing protein
1573_sll1256-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
1383_sll0241-sacB GTGAAAATGAAACCATGGCGTTTTC… transcriptional regulator
1257_sll1155-sacB ATGGCGCTCAGCGGGGTCGCCATTG… Cyanobacterial Signature Protein
1195_sll1623-sacB ATGTCCACCCCCGCCATCATTGCCC… energy-coupling factor ABC transporter ATP-binding protein
1005_sll1271-sacB ATGAACTTCACTAAACAGTTTACTT… Cyanobacterial Signature Protein
1069_slr1852-sacB ATGTCATCAAGAAAAAATTACTACT… hypothetical protein
0943_slr1234-sacB ATGGCAGAAGATACCATTTTCAGTA… protein kinase C inhibitor
0501_slr1847-sacB ATGGCACAAGGTAAAGGTTTCGGAT… YbaB/EbfC family nucleoid-associated protein
0439_sll1503-sacB ATGAAGTTTGCAACCTATGAGCATT… hypothetical protein
0249_sll1658-sacB ATGGCGCTAGGCTGGGGTCAGACTG… glyoxalase/bleomycin resistance/dioxygenase family protein
0313_slr0975-sacB GTGGAGGAAACGGTCTTGGACGAAC… hypothetical protein
0187_sll1037-sacB GTGGTTGTGATTGCCCTTTTTCCCT… TAXI family TRAP transporter solute-binding subunit
3493_slr6038-sacB GTGGAGTTGATGAAGGATGACCGTT… Predicted restriction endonuclease, HNH family
3557_slr6102-sacB GTGTCTAGGATTATGAAATCAAGCC… type I restriction-modification system R subunit
3367_sll5044-sacB ATGATCCAAGAGTTTCAGCGGTTTA… hypothetical protein
3431_ssl5108-sacB GTGAGGAGTTCTAGCCATGGAAAGC… DNA cytosine methyltransferase
3241_slr7073-sacB ATGCCTAACCCCACCGTTGAAATTA… hypothetical protein
3115_slr1179-sacB GTGGATGGCATTGATGCCTGTTTAG… anhydro-N-acetylmuramic acid kinase
3053_sll0723-sacB ATGGCTAACAAATTCAAATTTACTG… DUF4114 domain-containing protein
2863_sll0503-sacB ATGAATAATAATTCCTTGACTGATT… DUF697 domain-containing protein
2611_slr0505-sacB GTGAACAGGGTGAGAATTTGGAGTA… biopolymer transporter Tol
2675_slr0108-sacB ATGGCAATGGTTAGTTTTGCCTGGC… AsnC family protein
2359_slr0496-sacB ATGGAAAATCCCCTGCAAAAAGTGG… hypothetical protein
0051_slr1114-sacB ATGATTAATTTTTTCTCTACCCATA… hypothetical protein
2233_sll0010-codA GTGATTAAAATTCGAGGCTTTCCGG… hypothetical proteins
2297_slr0049-sacB ATGGCTAAAGTAATGATTGTGGGAG… saccharopine dehydrogenase family protein
1919_sll0269-sacB ATGACCGAACCCCTTTTCTGGCTGG… hypothetical protein
1983_ssl0259-sacB ATGAATTATCCAATTGTTATTTATC… type II toxin-antitoxin system HicB family antitoxin, type II toxin-antitoxin system HicA family toxin
1793_slr1682-sacB ATGACAAAGACAAGAGAGGCGAAAA… transposase
1857_sll1537-sacB ATGCCTCCCCAATTTCCCTTAGCTA… NUDIX domain-containing protein
1667_slr1472-sacB ATGGAAAAAATAGTTACCCAAGCCC… protein jag
1605_slr1959-sacB ATGGATAAACCCAGTTCCTTTTTCG… hypothetical protein
1415_slr2099-sacB ATGGATACAGCAACAACCAAGGGCA… hybrid sensory kinase
1479_slr2120-sacB ATGCCCCTTGTCTCCCTAATTATTC… glycosyltransferase
1289_sll1956-sacB ATGATTCATGCTATTGAGACAACGT… Uma2 family endonuclease
1163_sll1698-sacB ATGCTCATGGACTGGATTCCTTTCG… hypothetical protein
1037_slr0887-sacB ATGTTGTACTGGTGGGATGGACAAT… hypothetical protein
0975_sll1355-sacB GTGCAGATAATGCAGTCACCTCTGC… Uma2 family endonuclease
0785_sll1791-sacB ATGAAAAGTCTGACAGCCTATGAAA… transposase
0849_sll1737-sacB ATGGCATCTAACAGTACGGCAGACG… Tic20 family protein
0659_sll1573-sacB ATGGTGACCAAGTTTAGTTTTCCTG… hypothetical protein
0533_slr2044-sacB ATGCTAACAGTGCCCAGCCCTAATG… metal ABC transporter ATP-binding protein
0597_sll0984-sacB ATGCACCATGTTTCTATTCGTACTG… Cyanobacterial Signature Protein (glyoxalase/bleomycin resistance/dioxygenase family protein)
0407_slr0695-sacB ATGAGAAAAAGACTCACCCGTTTCC… hypothetical protein
0281_slr1306-sacB ATGGGGCAACCAGGTCTAACAATGG… DUF697 domain-containing protein
0345_slr1071-sacB ATGAGAAAAATTTTTTGTCAGAATG… methyltransferase domain-containing protein
3525_slr6070-sacB ATGATTACTGCTTGCAGTCAGGAGC… thermonuclease family protein
3399_sll5076-sacB ATGAAAGCTACTGTATATATTGCAA… dihydrofolate reductase
3463_slr6008-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3273_slr7105-sacB ATGTTAAGAGAACTAATTAAGCTCT… transposase
3337_sll5014-sacB ATGAGTCAAATATTTCAATGTCCTT… hypothetical protein
3211_sll7043-sacB ATGCCTAAAAAACTATCAGTTCCTG… hypothetical protein
3021_sll1474-sacB ATGATATCAAATTTTGGACATATTG… transposase
2769_sll0676-sacB ATGGCTAAAAATGATTTGCAATCTC… DUF4334 domain-containing protein