Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Gene ID Sort ascending
3368_ssl5045-sacB GTGTTTGAAAAGCCCCCCTGGTCCC… no conserved domains
3432_sll5109-sacB ATGACTCAATTCTACAAGCTAACCA… hypothetical protein
3242_ssl7074-sacB GTGTGCCAGGAAAACCCAGGTCATT… hypothetical protein
3306_sll8032-sacB ATGAGTAACCTTATTCTGCAAATCA… hypothetical protein
3054_sll0722-sacB ATGATCAGAACTAAATTGGTTGAGT… hypothetical protein
2928_sll1340-sacB GTGGATAGACCACCAGTTTTAACTA… Cyanobacterial Signature Protein
2802_sll0744-sacB ATGGATCTCACTACCCAATACCTCG… dihydroorotate dehydrogenase-like protein
2676_slr0109-sacB ATGATGTTAGATACCACATTTTTGT… mechanosensitive ion channel family protein
2424_slr0420-sacB GTGACCCCCGGTGGCTTGATCTTCT… hypothetical protein
2234_slr0019-sacB ATGGTGTTTCGATTCCCCTCGCCAG… fimbrial biogenesis outer membrane usher protein
2172_sll0752-sacB ATGCGTATTTCTGACTTTTTCAGTG… periplasmic component MlaD domain
1921_sll0267-codA ATGTCCATCATGCCCCCTCCTCCGT… EAL domain-containing protein
1795_slr1683-sacB GTGTCAGTAAATGCCTATGGTTACT… transposase
1859_slr1627-sacB GTGTTAACCATGGGTTGGTCTAACA… membrane protein
1733_sll1433-sacB ATGGCAGTGACGTCTCCATGGTTCC… NAD(P)H-hydrate dehydratase
1543_slr0813-sacB GTGAATCTTGGCCAATGGGGGGAAA… ceramide glucosyltransferase
1607_ssl3573-sacB GTGATTGTTGATCAACCTAATGGCG… hypothetical protein
1417_slr2101-sacB ATGAAATTTATCTCCAGCTTCTTTG… cupin domain-containing protein
1481_slr2122-sacB ATGAACTCTGTAAAAATTGCGGCCC… acylneuraminate cytidylyltransferase
1291_ssl3692-sacB ATGAACTCTCAGGTTAAAACTCCTT… DUF2442 domain-containing protein
1355_sll1586-sacB ATGGTCACCGATCGCCAAAAGTCTG… DUF748 domain-containing protein
1165_slr1811-sacB ATGATTGAGGAAGGTTGCATGGTTG… DUF29 domain-containing protein
1039_slr0889-sacB ATGTTTGCCTTACCTCAAGCCGGCG… AarF/ABC1/UbiB kinase family protein
0535_ssr3467-sacB GTGGCTATTCTCGTTCCTTCCGCTC… hypothetical protein
0599_sll0983-sacB GTGCCCCGCCAGGCGATCGCCAATG… hypothetical protein
0409_slr1591-sacB ATGGCCAAAAAACTATTACTGGTGG… hypothetical protein
0473_ssl1918-sacB GTGTTATTTACAGGCACGGCTATGG… hypothetical protein
0347_slr1073-sacB ATGACAACCTCCCAATTAAACCCCG… glycosyltransferase family 1 protein
0221_sll1677-sacB GTGCTTTCCCCGTCTGGGATGGGGA… spore maturation protein B
3527_slr6072-sacB ATGGAAGGGGATGTTGTACAGCTAA… DUF2357 domain-containing protein
3401_slr5078-sacB ATGAAATTTTCCTTTCCTTGGCACT… hypothetical protein
3465_sll6010-sacB ATGACACTCATTGCAATTATGAAAT… hypothetical protein
3275_sll8001-sacB ATGTTTGAATGTAAAAGTGGCAACA… Appr-1-p processing protein
3339_slr5016-sacB ATGGGAAAAGCAGGACAAGCATTAA… hypothetical protein
3213_ssl7045-sacB GTGGCTGCTAAACTCTCTTGCGCTG… hypothetical protein
3023_sll1472-sacB ATGTTGAAACTAGCCGGTAAAAAAG… hypothetical protein
3087_sll0449-sacB ATGGCTGGCAATCAACCGGATAAAT… hypothetical protein
2771_slr0703-sacB ATGATAATTCGAGAATTTTACAGCA… transposase
2645_slr0616-sacB ATGTCTGAACCGAAACCAAGCCAGC… MFS transporter
2709_sll0282-sacB GTGCAAAAAAATCTGATGGCAATGC… hypothetical protein
2519_sll0546-sacB ATGGCCAGTTCCAAACCTCCAGCTC… translation initiation factor
2393_sll0608-sacB GTGAATGCTCTCTCAATTCCCACTT… Ycf49-like protein
2457_sll0181-sacB ATGAATATAAATAAAGGCAAAGTAA… hypothetical protein
2267_slr0231-codA ATGTTATTCCAAAGATTTTTGGACT… DNA-3-methyladenine glycosylase 2 family protein
2331_slr0069-sacB ATGACTTCCCCACCAACTCCAGACC… hypothetical protein
2015_sll1858-sacB ATGTCTAGTTCCCGTGGCCCCTATA… hypothetical protein
2079_slr0168-sacB ATGACTATTCAATACACCCCCCTAG… hypothetical protein
0079_slr1128-sacB ATGGAAGCCTTTTTTCTCTTCTTTC… erthyrocyte band 7 integral membrane protein protein 7.2B stomatin
1889_slr1649-sacB ATGTCCCATTCCACTGATCTTTCCG… chromophore lyase CpcT/CpeT
1763_slr1168-sacB ATGTTAACCGTTACTAATTATCCCC… DUF433 domain-containing protein
1827_slr0944-sacB ATGGTCAATCGCATTAACCCCAAAG… transporter
1637_slr1978-sacB ATGGACTTGATGCGGTCTTTACCCA… hypothetical protein
1701_sll1174-sacB ATGCGCGTTGAACCCTGTTGCCAAG… FkbM family methyltransferase
1575_slr1339-sacB ATGCTATTGAGGATTGAAACCAGAT… hypothetical protein
1385_sll0238-sacB ATGCGATCGCCAACTAGCTTTGGGG… iron ABC transporter permease
1323_slr1715-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
1197_slr1737-sacB ATGAAATTTCCGCCCCACAGTGGTT… hypothetical protein
0881_sll1469-sacB GTGATGACTGAGCAGAAATACTTGA… GNAT family N-acetyltransferase
0945_slr1236-sacB ATGACCCCATTGACTTTTCGTAACT… DUF192 domain-containing protein
0819_slr1215-sacB GTGGTCTTAAACCGTTTAGCGTTGG… hypothetical protein
0629_ssr2333-sacB ATGACGTTATTGGATTTATCGGTGG… iron ABC transporter
0693_slr2025-sacB ATGACTATGGCATCCCCTACACCAG… Cyanobacterial Signature Protein
0441_ssr2708-sacB ATGAGCGTAGCCCTAGATCGGCAAA… hypothetical protein
0251_slr1800-sacB ATGGTTGAGCTTGCGCCTTCCCCTG… Cyanobacterial Signature Protein
0125_slr0241-sacB ATGCACAGTATTTTGTTTGCCATTG… M56 family peptidase
0189_ssl2009-sacB ATGGCTCAAAAAGATAACTTCGCCG… thylakoid membrane protein
3495_slr6040-sacB ATGAGATTGTTGCTGGTGGAGGATG… two-component response regulator
3559_slr6104-sacB ATGAAAAATATTATTATCTCAAATT… hypothetical protein
3369_sll5046-sacB ATGAACACTTCTTTCCTCGAATCCC… sulfotransferase
3433_slr5110-sacB ATGCTCTTGAGGGAGCAACCTTTTA… XRE family transcriptional regulator
3243_sll7075-sacB ATGAGCATTTTACGATACGAAGAAA… hypothetical protein
3307_sll8033-sacB ATGCGAGCCTTACCTTCTTTCCCCA… hypothetical protein
3117_sll1109-sacB ATGTCTGCTTATCTGTTTAATCAAG… Cyanobacterial Signature Protein
3055_sll0721-sacB GTGGAGGGTTTCAAAATGGGGAAAA… leukotoxin; LtA
2865_sll0501-sacB ATGACCATTGAACTGTCTATTGTGA… glycosyltransferase
2803_sll0743-sacB ATGACTTTAAAAATCAATGCCAATC… DUF29 domain-containing protein
2613_sll0482-sacB ATGCCAATGGCGCTTTGGGGCATCG… DUF2974 domain-containing protein
2677_sll0096-sacB GTGATTTTAGTTGTGGGCGCCACCG… NAD-dependent epimerase/dehydratase family protein
2487_ssr1528-sacB ATGGCTAATACAACTAAAGGAGCCG… DUF4090 family protein
2551_ssl1552-sacB ATGGTTTTCCCTTCCCCCAATGGTG… hypothetical protein
2361_sll0691-sacB ATGGGCGCATCTTTTCGGGCAGAAC… low-complexity tail membrane protein
2425_slr0421-sacB ATGAGCCAATCACCAATTCTGTTTT… alpha/beta hydrolase
2235_sll0008-sacB ATGGTGTCAATATTTCATCAATTGG… hypothetical protein
2299_slr0050-sacB GTGGAAATTACTTTTCTTGGTACCA… ribonuclease Z
2110_sll0154-codA ATGAGCCATAGCCGCTTTAAGTCCG… YvcK family protein
2174_slr0782-sacB GTGGTGATACGATCAGGCAAAACTA… amine oxidase
2048_ssl1807-sacB ATGAATTTTTACTGGCCCCGTTTTG… hypothetical protein
1922_sll0266-sacB ATGTGTACTATGACTGCTGTGATTA… hypothetical protein
1796_slr1684-sacB ATGACTCGAATACCAGATATTAAAT… transposase
1544_sll0812-sacB ATGGGTTCCCCAGAATTTTCTCCTA… hypothetical protein
1608_slr1962-sacB ATGAAACGCCGTCAACTCCTTGGCC… C4-dicarboxylate ABC transporter
1482_slr2123-sacB ATGAAATGGAAAGTTTTAGTAACCT… D-isomer specific 2-hydroxyacid dehydrogenase family
1292_slr2062-sacB ATGAAGCTAAGGTATCAGTACCGAT… transposase
1356_sll0254-sacB ATGACTGAATTACCCCCCAATCCTA… FAD-dependent oxidoreductase
1166_slr1812-sacB ATGGTTGCTGAACTCCGCAAAACAA… DUF29 domain-containing protein
1230_sll0843-sacB ATGAAGCTAGCATTTTTTCAAAAAT… hypothetical protein
1040_ssr1499-sacB ATGGACGTGTTACTCGATCGCCTAA… hypothetical protein
0978_slr1444-sacB ATGGAAACAACACATAGCTTTGGCG… CHAD domain-containing protein
0788_sll1786-sacB ATGCATTTAGTTGATACCCATGTCC… YchF/TatD family DNA exonuclease
0662_ssr2857-sacB ATGACTATTCAACTAACTGTACCCA… copper chaperone
0726_slr1147-sacB ATGGCCGGTTCCATCTCATCAATGT… sensory transduction histidine kinase
0536_slr2046-sacB ATGAGCGTCTACAATCTTGATTTGT… cadherin
0600_sll0982-sacB ATGACTACCAACAACAGCACTTTGT… hypothetical protein
0410_slr1592-sacB GTGCTGGACTTCTACTCCCAACGCT… RluA family pseudouridine synthase
0474_slr1753-sacB GTGGTGGAAATATTGTTAATTTCAC… CHAT domain-containing protein
0284_sll1186-sacB ATGTTGCTAGCCCTAGACCGCATCA… Uma2 family endonuclease
0348_slr1074-sacB ATGCCCACCATAAGAATTAATAAAT… hypothetical protein
3528_slr6073-sacB ATGAGTTTACCAACTGAATTGATTG… hypothetical protein
3402_sll5079-sacB ATGATTCTCGTCAGTTTGTATCCGT… glucose 1-dehydrogenase
3466_slr6011-sacB ATGATTACTGCTTGCAGTCAGGAGC… thermonuclease family protein
3276_sll8002-sacB ATGACCGTTCCCGCTCAGCCTAAGA… DUF4433 domain-containing protein
3340_slr5017-sacB ATGCTCTCAGTAACTCACCTCAAAA… DNA polymerase subunit beta
3150_slr0596-sacB ATGCGACCTTCCGCCCTTATTCCCC… creatinine amidohydrolase
3214_ssl7046-sacB ATGCAGGTGCTTACCTACCTCAAGT… putative toxin-antitoxin system toxin component%2C PIN family
3088_sll0448-sacB ATGAATAGACTGAGAAATTTTGCAA… hypothetical protein
2772_smr0002-sacB ATGTTAAGAGAACTAATTAAGCTCT… transposase
2836_slr0042-sacB ATGAAACAATATCGATTCACTTGGC… Cyanobacterial Signature Protein
2646_ssr1038-sacB ATGAATACCACATCTCCCATTGACT… hypothetical protein
2710_sll0281-sacB ATGGTTGCCATCGATAATAATTTGA… DUF1822 family protein
2520_sll0545-sacB ATGGCCCTATGCTTAAAAATTGTCA… phosphatase PAP2 family protein
2584_sll0082-sacB GTGAACGAAGAGCGTTTTGCCGACA… hypothetical protein
2458_ssl0350-sacB GTGAAATATACAATCGTTATTCAAT… type II toxin-antitoxin system HicA/B family antitoxin
2268_sll0192-sacB ATGTTGCCGAAGATTCTACTGCTCA… hypothetical protein
2332_sll0051-sacB ATGGTTACCGAACAAGACCGTGAGT… nucleoside deaminase
2142_slr0388-sacB ATGTGGCAATCAATTCGTTCCCTCA… ComF family protein
2206_slr0358-sacB ATGACCCCATGGACAATTTGGTTTA… hypothetical protein
2080_slr0169-sacB ATGGGCATCGAACTCCGTAGTTACG… hypothetical protein
1954_slr0400-sacB GTGCCAAAAGTCGGCATCATTTTCA… NAD(+) kinase
1764_slr1169-sacB ATGCAAGGTTTACTGCTCATTTTTT… DUF1049 domain-containing protein
1702_sll1173-sacB ATGGCCCAGGCTCTGTTGAATAACG… FkbM family methyltransferase
1576_slr1340-sacB ATGATTGACATTGTAAAAGCAGATC… GNAT family N-acetyltransferase
1386_sll0237-sacB ATGCTTTTATCAACGAGGAAACAAT… extracellular solute-binding protein
1324_slr1716-sacB ATGTTAAGAGAACTAATTAAGCTCT… transposase
1198_sll1621-sacB ATGACCCCCGAACGAGTTCCCAGTG… peroxiredoxin
1072_slr1855-sacB ATGAGTCCCAAAATTAACTTTCCTT… AGE family epimerase/isomerase
0882_slr1535-sacB ATGGTATCGATCGCCGAACGGACAA… hypothetical protein
0504_sll1751-sacB ATGGCTGTTGAACCCATTCCCCCAA… hypothetical protein
0568_sll1830-sacB ATGATCAATCGTCAGGACCTCAAGC… hypothetical protein
0378_sll0654-sacB ATGACCATTAACAGCGGCGTTAGTT… alkaline phosphatase
0442_ssr2711-sacB GTGGGTTTGCAACGGTGGCAGGGTA… hypothetical protein
0252_sll1656-sacB ATGAACCGACGCAACACCGAATTGG… DUF3611 family protein
0316_sll0922-sacB GTGATTCCAGTTCCTGGGCCGTTAT… hypothetical protein
3496_slr6041-sacB ATGCAGAACAATAGATTATTCAATC… two-component sensor histidine kinase
3560_slr6105-sacB ATGATATCAAATTTTGGACATATTG… transposase
3370_sll5047-sacB ATGACCCCCCAAGCCCAACTGGTTC… hypothetical protein
3434_slr5111-sacB GTGCAAATAAACTACTACACTGCAA… hypothetical protein
3244_slr7076-sacB ATGTCGCTGGACACGCTGGTGCCGG… HNH endonuclease
3308_sll8034-sacB ATGCTAACCACCCAAATCACCCAAA… 2-nitropropane dioxygenase
2992_slr1563-sacB GTGCCCGTGAATTCCCCAGCCCCCT… fructosamine kinase family protein
2866_slr0541-sacB ATGCAAGCTCACTTTTTCCAGCACG… amidotransferase
2930_sll1338-sacB GTGTTAAACAAATCTGTTCAGATCC… hypothetical protein
2804_sll0742-sacB ATGGTCACTCAGATGAATACCAAAA… DUF29 domain-containing protein
2614_sll0481-sacB ATGGTGCAGTCAACCGTCGAACTTT… hypothetical protein
2678_sll0095-sacB ATGATGCTCATTTCGCAACCGATGG… AarF/ABC1/UbiB kinase family protein
2488_slr0904-sacB ATGTTAGCAAGGGTTTGGAGTGCTT… magnesium chelatase
2236_sll0007-sacB ATGGTTTTAGCCTCAGCAAAAGTAC… Uma2 family endonuclease
2300_sll0072-sacB ATGACTAATATTCCTTACCGAGAAA… helix-turn-helix domain-containing protein
2301_sll0071-sacB ATGCGTAAACTTTACTTTTTATTAC… glycosyltransferase
1985_slr0157-sacB ATGGCTATCTCTCTAGATGAAGATA… hypothetical protein
0049_slr1501-sacB GTGATGTCAACCACGCTAAATACCC… GNAT family N-acetyltransferase
0113_slr0740-sacB ATGCTGGGAAATTTTCAACATAGCC… hypothetical protein
1923_sll0265-sacB ATGGCACAAACTGTTAGTGGCTTTA… ferritin-like domain-containing protein
1797_sll1559-sacB ATGGATAATAAGCAAATGTTGATGA… Serine/glyoxylate aminotransferase, soluble hydrogenase 42 kD subunit
1671_slr1474-sacB ATGGCGAGTGGAAATAAGTTTCAGT… NlpC/P60 family protein
1735_slr1533-sacB ATGACAGCTCCCCTAACCCTCAACT… hypothetical protein
1609_sll1895-sacB ATGCTTTATCAATTGGTCGTTGATT… EAL domain-containing protein
1419_slr2103-sacB GTGCTAAGAGCGACCAGTGATCGAT… acyltransferase family protein
1483_slr2124-sacB ATGAAACCAGTTGTTCTTATCACCG… short-chain alcohol dehydrogenase family
1293_sll1951-sacB ATGGCACTAAGTCCTAACGTAATTG… hemolysin
1357_sll0253-sacB GTGAAAACTGCGATGATCCCCATTT… hypothetical protein
1167_slr1813-sacB ATGGTTGCCGAACTCCGCAAAACTA… DUF29 domain-containing protein
1041_slr0890-sacB ATGGGTTTAGTTTATGCCAATATTG… clan AA aspartic protease
0915_sll1634-sacB ATGAGCAAGGAATTTCGAGAGCTAT… hypothetical protein
0979_ssr2422-sacB ATGACTAACAATGACAATATTCGCT… thylakoid membrane protein
0853_sll1736-sacB GTGAACAACTTTTCCCCCAAATTTG… hypothetical protein
0663_slr1708-sacB ATGCAGTCCCAATCGAGGATAAAAG… lysostaphin
0727_slr1148-sacB ATGCGAATCCCTTACGAAAAAGCAA… DUF4269 domain-containing protein
0601_sll0981-sacB ATGAGCCTGAAAAAATTTAAGGAAG… hypothetical protein
0411_slr1593-sacB ATGTTTATATTTCCACGCTTTCCCC… EAL domain-containing protein
0349_slr1075-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
0223_sll1675-sacB ATGACCCTTTCTTCTGGTTTACCTA… VOC family protein
3529_slr6074-sacB ATGAAAATTATTGTTAAATTACAAG… hypothetical protein
3403_sll5080-sacB ATGAGCACCATCACTACCAAAGACG… non-heme chloroperoxidase
3467_slr6012-sacB ATGGACAGCCCCCGGCAATTGTCAT… hypothetical protein
3277_ssl8003-sacB ATGACCAATCAACAGGGTAATGTTA… hypothetical protein
3341_slr5018-sacB ATGAATCGTGACAACGCTTATCTGC… DUF86 domain-containing protein
3215_sll7047-sacB ATGACAAACCGAATGATAGAGACTT… DUF4386 domain-containing protein
3089_sll0447-sacB ATGGAATTTTTTAAACTTATATCAG… hypothetical protein
2963_slr0654-sacB GTGGTAATTCCAACCCTTAAGGCAC… hypothetical protein
2773_slr0704-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
2647_slr0617-sacB ATGATTAACGGAAAGCCCCAACCTC… hypothetical protein
2711_sll0280-sacB ATGGAAAAAGATCATTGTTCCCTCG… hypothetical protein
2395_slr0643-sacB ATGTGGCTTCTTTTGCTCATCCTTG… fbt
2459_sll0180-sacB ATGGTTAGAAAACGCTCCCAATTCC… efflux RND transporter periplasmic adaptor subunit
2269_slr0232-codA ATGGGTTGGGAATTTTTTTCGCTAG… DedA family protein
2143_slr0769-codA ATGCAGAAACAAGTCTCTCCCCTAG… L-2CD-transpeptidase
2207_sll0310-codA ATGAGTTTGAGTTACCGTATTCGTC… N-acetyltransferase
2017_slr1935-codA ATGGAATCTAAGTTGCTGAGTGCAA… MFS transporter
1955_slr0401-sacB ATGAATTTACCCTGCTATTCCCGCC… spermidine/putrescine-binding periplasmic protein
1765_slr1170-sacB GTGTCCCCACCATTGCCGCTGTTAC… TMEM165/GDT1 family protein