Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Sort ascending Gene ID
0287_slr1307-sacB ATGACCTACACAACCCAGCAATTGC… hypothetical protein
0225_slr1788-sacB ATGGTTAGAGCTATACGTCCTCCCA… hypothetical protein
3532_ssl6077-sacB ATGCTCAAATTTATAGGTATTGCAT… hypothetical protein
3406_sll5083-sacB ATGATATTTCCCTTTGATATAAATA… hypothetical protein
3470_slr6015-sacB ATGAAAATTATTGTTAAATTACAAG… hypothetical protein
3218_sll7050-sacB ATGCTTATTACCCTCGAGCCTACTT… hypothetical protein
3092_sll0444-sacB ATGAAAATTACGGAGATAGTGGCCC… hypothetical protein
2462_slr0207-sacB ATGAATAACCTTACTGATCAGCTTG… hypothetical protein
1390_ssr3532-sacB ATGGTTACAACTTTTAGCAAACCAT… hypothetical protein
1012_sll1267-sacB GTGGGGCAAATTTCAACTTTTACGG… hypothetical protein
0824_slr2071-sacB ATGTTTAAATTCCTTGCCAATAATT… hypothetical protein
0508_ssr3129-sacB ATGTGTTTTTTTATTATCCAAGAGG… hypothetical protein
0572_ssl1911-sacB ATGTCTACTCAACAACAGGCTCGCG… hypothetical protein
0194_sll1032-sacB ATGCAGTTACCGCCCGTTCACAGTG… hypothetical protein ccmN
3500_slr6045-sacB ATGCTCTTAACCAGTATGGATCAAA… hypothetical protein
3374_slr5051-sacB ATGCCAACAGTTGAAACTGACTTGG… hypothetical protein
3248_slr7080-sacB ATGGTTAGTTATCATTTGCACCTGA… hypothetical protein
2934_slr1429-sacB ATGGAAGCCAAGATCGAACAACGGC… hypothetical protein
2682_slr0112-sacB GTGGTCATGAGAAACGCTTTAACTA… hypothetical protein
2304_sll0069-sacB ATGACCTATTGTTTGGGTTTAATTA… hypothetical protein
1422_slr2105-sacB ATGGCTCGGCTTACTGCTCTATTTC… hypothetical protein
1486_slr2127-sacB ATGGCCACCACCCCCCAAGAAGTCT… hypothetical protein
1170_slr1816-sacB ATGAAAATTGAAAAGCAAGTTAATG… hypothetical protein
1234_sll0839-sacB ATGCCAAGACCTTGCTGTTTAAAAT… hypothetical protein
0666_sll1570-sacB GTGGTGAAATCAGAATCAGGTATTT… hypothetical protein
0604_slr1376-sacB ATGCTACACCGGAAAATCTATCAAC… hypothetical protein
0414_sll1516-sacB ATGGGCAAAACCCCCCTGGGACTGA… hypothetical protein
0036_sll1401-sacB ATGAGATATAAGGTGGATCTAGAAA… hypothetical protein
0226_slr1789-sacB ATGAACTTTTATATTGCTCAAGCTA… hypothetical protein
0101_slr0732-sacB ATGAAACCAATCCACAGATACATCA… hypothetical protein
3471_slr6016-sacB ATGACCAGACTCTTTAACCTAGAAT… hypothetical protein
3281_sll8007-sacB ATGCGAATCCTGCTTGATGAATGCG… hypothetical protein
3219_ssl7051-sacB GTGTTCGGAGGGGGCAACCATCTAT… hypothetical protein
3093_sll0443-sacB GTGAAAAGCTGGATTTTGTTCTCTT… hypothetical protein
2903_slr0552-sacB ATGTCCACTGTAATTCCTACCTCCC… hypothetical protein
2841_sll0518-sacB GTGACAAGGGCATTTTTGCTTGGCT… hypothetical protein
2021_sll1851-sacB ATGCGTTATGACAATGGTTGCATTG… hypothetical protein
2085_ssl0312-sacB ATGAGTAACTTAGAACAAATTGAAA… hypothetical protein
1959_ssr0657-sacB ATGATTCCCTTTGCTTCCCAAACCT… hypothetical protein
1769_sll1086-sacB ATGTTACTTTTCCTACTTCCAGGCA… hypothetical protein
1643_sll1873-sacB ATGTTAAAAAAATTGTTTGGCGCTA… hypothetical protein
1203_sll1618-sacB ATGTTGCCGTTGATTTTACCCGCTC… hypothetical protein
1013_sll1265-sacB ATGAGCAATAATCCTTCCCCTCACA… hypothetical protein
0951_ssl2245-sacB ATGTCTATCAATGCTTACAAACTAG… hypothetical protein
0635_slr1395-sacB ATGAAACGTCCCACCCTCTACTGTG… hypothetical protein
3501_ssr6046-sacB ATGGAAAGTAGGCGATTATCTATCC… hypothetical protein
3375_sll5052-sacB ATGGCTCACGATGAAGCAGAAGAAT… hypothetical protein
3249_slr7081-sacB ATGGTCAGCATTCACATTACCCGCC… hypothetical protein
2997_slr1567-sacB ATGAAACTTTTTCATTGGCTACTTT… hypothetical protein
2935_sll1333-sacB ATGACTGTGATTTTTCGTGGTTGGC… hypothetical protein
2809_sll0737-sacB ATGGCCGCCGATTCATCCTCTCCTC… hypothetical protein
2683_slr0114-sacB GTGATGTTCCGCCCCTTGTCCCGGG… hypothetical protein
2493_slr0912-sacB ATGCTATCACTTCAAGACAACTACT… hypothetical protein
2557_sll0827-sacB ATGCCCCGTCCCTTTGACCGATCCA… hypothetical protein
1171_sll1696-sacB ATGGTATTTAAGCTGAATTTACACG… hypothetical protein
1045_sll0863-sacB GTGAAAATTTCAACATCCATGCCCC… hypothetical protein
0541_slr2052-sacB ATGATTGCCCCTATTTGCCGTGCTC… hypothetical protein
0289_slr0962-sacB ATGTTGGCGTTGATGCTATCCGGTG… hypothetical protein
0037_sll1400-sacB ATGAAATTATTGTTTGACGAAAATC… hypothetical protein
3534_ssr6079-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3408_slr5085-sacB ATGACACTCCCTGCAATTATGAAAT… hypothetical protein
3220_slr7052-sacB ATGGTTGCCCCCTCCGAACACCAGA… hypothetical protein
2778_sll0669-sacB ATGGCTGCCGATGTGCAATATTTTC… hypothetical protein
2652_sll0588-sacB ATGTCATTATTCCCTCTTTTAACCG… hypothetical protein
2148_sll0772-codA ATGGGCTTAATTTGCGGTTTGGCGA… hypothetical protein
1896_ssr0759-sacB GTGTTTGTAACCAGAGTAGCTCTCA… hypothetical protein
1204_slr1742-sacB ATGGAATTAACAATCGGCTGGCTTT… hypothetical protein
1014_sll0877-sacB ATGAAACCAACTGGTTGGAACCAAT… hypothetical protein
1078_slr1862-sacB ATGGCGATGTTACCTCTGCCAAACT… hypothetical protein
0636_slr1396-sacB ATGAAAAAACCAGATATTGATGTGT… hypothetical protein
0574_sll0997-sacB ATGGCCCCGAAAAATTCCTGCCACA… hypothetical protein
3250_slr7082-sacB GTGGCTACCATTTCCCAACAAATTA… hypothetical protein
2998_slr1568-sacB ATGAAACCTGAATTTGCCACTGTCC… hypothetical protein
2494_slr0913-sacB ATGAATAAGTTGCCAAAAATCACCA… hypothetical protein
2180_sll0325-sacB ATGCTCGCTAAATATTTTTCTGAAC… hypothetical protein
1738_ssl2162-sacB ATGCAATCCTCACAGACCTGGGCGA… hypothetical protein
1362_slr0262-sacB ATGGCTAATGAGGTCGTTAAAGCTA… hypothetical protein
0858_sll1730-sacB ATGATCTCCATAGATAAAAGTTATG… hypothetical protein
0542_sll1934-sacB ATGAATGCGGCAGAACAAGCCATTG… hypothetical protein
0290_sll0943-sacB ATGTTAAAAATTCTGCAAAAATTAC… hypothetical protein
0103_sll0702-sacB ATGGCCATCGTTATCAATTACCGTT… hypothetical protein
3535_slr6080-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3157_slr0601-sacB ATGTCCACGGAAAACCCCATCGAAA… hypothetical protein
3221_ssl7053-sacB ATGTTGGAAGAAACGATCGCCGTAA… hypothetical protein
3095_sll0442-sacB ATGGCTCTAATAGCAAGACTGATCG… hypothetical protein
2465_slr0209-sacB ATGGCTAGATCAAACAAGGACGATA… hypothetical protein
1771_ssr1951-sacB ATGGATCCCTTAACCAAATTAGTTT… Hypothetical protein
1141_sll2006-sacB ATGCAAATTACTCTAGACATCCCCG… hypothetical protein
0637_slr1397-sacB ATGGATAATCTAACCGACTTTGCAT… hypothetical protein
0701_ssl3615-sacB ATGAGCACCATCGAGCAAGTTCTCA… hypothetical protein
0449_slr1043-sacB GTGGGGAAATCTATGGTTAGTTCTA… hypothetical protein
3503_ssr6048-sacB ATGACAATAACAACACAAGCTCAAA… hypothetical protein
3251_slr7083-sacB ATGACAAGTCAAAATTTTGTTTCTG… hypothetical protein
3125_slr1187-sacB ATGACTGACTACTCCGCCCTTGATA… hypothetical protein
2495_slr0914-sacB ATGATTAACTTTTCCGAAAACAGGA… hypothetical protein
2307_sll0066-codA ATGGCTGATCGATTTTCTCCATCAG… hypothetical protein
1363_slr0263-sacB ATGCGGGTAGAGAATATTACCCAAG… hypothetical protein
1237_slr0867-sacB GTGCGTTTATTGTATCTAGCCCGAC… hypothetical protein
0985_slr1450-sacB ATGTTCAACTTTTTTGTCAGACTGT… hypothetical protein
3536_slr6081-sacB GTGGTTGCCCCTGCGGGGCATTTTT… hypothetical protein
3158_slr0602-sacB ATGCTTTCCTCCCTGTTCTCCGGTG… hypothetical protein
3032_sll0736-sacB ATGTGGACTCCCTGGCATTATCTCG… hypothetical protein
3096_sll0441-sacB GTGCGCATAATTTTGGTTGTCGCAC… hypothetical protein
2780_slr0708-sacB ATGTCCCAAAATTTTTTTGCCAATT… hypothetical protein
2276_ssl0788-sacB GTGGAACTTTTTGACCTAGTGGAAG… hypothetical protein
1836_sll0911-sacB ATGAATATTCAAGAAATTCAAACTA… hypothetical protein
1268_slr1253-sacB GTGTATTGTTCCATTGTCAGACCAG… hypothetical protein
1080_slr1863-sacB GTGATCGCCGATTTAAATACGGTTA… hypothetical protein
0638_slr1398-sacB GTGCGTCGCCCAATACAAATTCATC… hypothetical protein
0702_sll1911-sacB ATGGCCGGATTATTTGGCTTATTTG… hypothetical protein
3252_ssr7084-sacB ATGGCATCCCTTGTTGAAATCAAAG… hypothetical protein
2434_sll0371-sacB ATGACTTTAACAAGCGAGTCACTTC… hypothetical protein
1866_slr1634-sacB ATGGAGCTTTCGTCAAGGGAAGGAG… hypothetical protein
1930_slr0286-sacB ATGATTAATCCGATCAAGGCTGTCA… hypothetical protein
1552_slr0818-sacB ATGGGGGAAACTGTCATGCGTCTCA… hypothetical protein
1238_slr0868-sacB GTGGAACTATCATTGTTTTACCAAG… hypothetical protein
0986_sll1350-sacB ATGCCCAATGAGTTGTCCAATTTAC… hypothetical protein
0670_sll1926-sacB ATGGTTTTGGGCTTTGGGGCAGGGA… hypothetical protein
0735_sll1068-sacB ATGGCATCAACTGTAAATCGCCTTT… hypothetical protein
3473_ssl6018-sacB ATGCTCAAATTTATAGGTATTGCAT… hypothetical protein
3537_ssl6082-sacB ATGAGTGGCCGAGGTCGTCCTGGTG… hypothetical protein
3285_sll8011-sacB ATGTTAGGTTTTCTATTGGATGAAC… hypothetical protein
3159_sll0563-sacB ATGTCAACCCTACTTACCGACCCCC… hypothetical protein
3223_sll7055-sacB GTGGGCTCTAGTTACCCCTTTACCT… hypothetical protein
2277_ssl0787-sacB ATGGCCAGCGGCACTGACCCCGGTT… hypothetical protein
2089_sll0172-codA ATGAAAATTAATTTAATTTTTATGA… hypothetical protein
1899_slr0443-sacB GTGTTTGTTTGCGAACAGCCCATCT… hypothetical protein
1333_slr1721-sacB ATGATGGAACGTTTTTCCCCTACTA… hypothetical protein
0135_sll0225-sacB GTGGGGATTAATTTGCCCCAGCCCT… hypothetical protein
3505_slr6050-sacB ATGAAATTGAACCGTACAAGTACCC… hypothetical protein
3253_sll7085-sacB GTGGAATATCTGCGCTGGATGCGTC… hypothetical protein Cmr6-Cmr1 fusion protein
3191_slr7023-sacB ATGCCTAAACTTAAAAAGCTTACTC… hypothetical protein
2939_slr1451-sacB GTGACCCAGGTTTGGTTTCCCTCCA… hypothetical protein
2561_ssr1425-sacB ATGTGTATTTGTGTGAACTGCCATT… hypothetical protein
1867_sll1532-sacB ATGTTTAAGCCCCTTTTTCCCCTGA… hypothetical protein
1615_sll1892-sacB ATGATTACCCCACCCAGCTCACCCA… hypothetical protein
1175_slr1818-sacB ATGACCACCACCCTCGACGAAGTGC… hypothetical protein
1239_slr0869-sacB ATGTCCAAGATTGCGCCCCAATGTC… hypothetical protein
0797_slr1196-sacB ATGTATCCATCCTCGTCCCCGGGCC… hypothetical protein
0671_slr2005-sacB ATGAAACGACGAAAATTTATTCGTA… hypothetical protein
0672_sll1925-sacB ATGGCTGAAAATGGTCTGAACTGTG… hypothetical protein
0484_sll1642-sacB ATGATGGATTTAGGGGAGTGCTTGC… hypothetical protein
0358_slr1082-sacB ATGGCAAGTTTTCTAGCCTTACTGC… hypothetical protein
3538_ssr6083-sacB ATGACTATTCAAGAAGCCAAAGAGA… hypothetical protein
3286_sll8012-sacB ATGTCCATAGTAGTCAGTACCCGTC… hypothetical protein
3224_sll7056-sacB GTGATGGTGCTTATATTGAATAATT… hypothetical protein
2342_slr0476-sacB ATGACTGAGGAACAGCAGGGGCCCA… hypothetical protein
1900_sll0426-sacB ATGAAATACCATTATTCCCCATGGA… hypothetical protein
0956_ssr2062-sacB ATGAAAACCGCTAACTTTATCACCT… hypothetical protein
3444_ssr5121-sacB ATGCTCAAATTTATAGGCATTGCAT… hypothetical protein
3254_sll7086-sacB ATGCCAAACTTTGACCCCCGTACCA… hypothetical protein Cmr5
3318_slr8044-sacB ATGGGATCTATGACCGCCGAAGAAG… hypothetical protein
2876_sll0494-sacB ATGGTAGCAAGAGCTATTTTGCTGC… hypothetical protein
2814_slr0023-sacB ATGTTTTCTCCCAGTTCTGTTAGAA… hypothetical protein
2624_slr0514-sacB ATGGTTTTGGCAGGATCAAACGCCG… hypothetical protein
2436_sll0369-sacB ATGCAGAATTTTTTTGTCATTGGTT… hypothetical protein
2246_slr0217-sacB ATGGCAGACGCCATTGAAGTTAAAA… hypothetical protein
2184_slr0345-sacB ATGACGAATACTAAGACTACCCCCA… hypothetical protein
1680_sll1373-sacB ATGGGCCTGCTATTTCTGAAACTAA… hypothetical protein
1240_slr0870-sacB ATGCAAATTATCTACGACGAATTCC… hypothetical protein
0043_sll1396-sacB ATGAACTTTGATCTTTCAAAGCTAA… hypothetical protein
3475_ssr6020-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3413_sll5090-sacB ATGTCCATCGCTGGAAAATCCAAAG… hypothetical protein
3099_ssl0832-sacB GTGGCGATGACTAGGAGGTGGGCAG… hypothetical protein
2721_ssl0511-sacB GTGAGACTTAAGATGGGGGGCAAAA… hypothetical protein
2531_slr0579-sacB ATGAAACGGAACTATCTACTGACGG… hypothetical protein
2027_slr1939-codA ATGAATGCCCATGAAATTGCCCTGA… hypothetical protein
1775_slr1670-sacB ATGAAAACATTGAATCGTATCCATC… hypothetical protein
1523_sll1219-sacB ATGCACTACGCCATCCCCAAAACCT… hypothetical protein
1083_slr1866-sacB ATGCAAAGCTGGCGACACAGGTTCC… hypothetical protein
0831_sll1965-sacB GTGTGGTTTCCCGAACTCAGGGCAA… hypothetical protein
3507_sll6052-sacB ATGTTGAACCGTTTTTGGGTATGGT… hypothetical protein
3445_sll5122-sacB ATGAACAGTATTGCCCTGGTGGATT… hypothetical protein
3193_slr7025-sacB ATGAATATAACCTTTAAGTTTAACT… hypothetical protein
3067_slr1658-sacB ATGAGCACTGACCAAACCAACGTCA… hypothetical protein
2563_ssl1533-sacB ATGTCTGACCACACCGCCCAGATTA… hypothetical protein
2247_ssr0349-codA ATGTTGGTGCCCATTCTCATTTTTG… hypothetical protein
1429_sll1426-sacB GTGATGAAATCTTTACTGCGGGGAA… hypothetical protein
0926_slr1222-sacB ATGATTGGACAGGTAGTTAGGCTTG… hypothetical protein
0612_ssr2315-sacB ATGTTTAAACCCAGCTTACTTTTGT… hypothetical protein
0422_sll1511-sacB ATGACGCTGTTAAGTAAACTCCTAG… hypothetical protein
0360_slr1084-sacB ATGCAACTTAATCAATACCAGCAAG… hypothetical protein
0170_sll1318-sacB ATGCCCTCGTCACCAGTTCAATTTA… hypothetical protein
3476_slr6021-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3540_ssr6085-sacB ATGCACCACGACACCAAAGAAGCGA… hypothetical protein
3414_ssl5091-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
2974_sll0623-sacB ATGGTGGTCGAGAAGCTATTGATTG… hypothetical protein
1714_ssr2130-sacB ATGACGACCCATTTCATCACTGCTG… hypothetical protein
1462_ssr3570-sacB ATGTCGGACGTGATGATCCGGGTAG… hypothetical protein
1210_slr0852-sacB ATGTTACACTTCGCCCAAATTACCA… hypothetical protein
0328_slr1612-sacB ATGTCTGCCATAACTGCCCAAGAGT… hypothetical protein
0138_slr0250-sacB ATGGTTCGTTTGCTCATGGTATTCC… hypothetical protein
3508_sll6053-sacB ATGAACAATCAAATTAGTTTGACTC… hypothetical protein
3572_sll1749a-sacB hypothetical protein
3194_slr7026-sacB GTGCTTAAAATGAATTCCCCAACTT… hypothetical protein
3068_slr1659-sacB ATGGAAATAACCACTGAAGACTATC… hypothetical protein
2942_ssr2439-sacB ATGCAAGCACAAACTTTCTCCCACC… hypothetical protein
2564_slr0845-sacB GTGTCCGGTAAAAAAAATGATTACG… hypothetical protein
1492_sll1241-sacB ATGGGTATTACATCAAAAATATTTG… hypothetical protein
1178_slr1819-sacB ATGGAAGCCAAGGAATTGGTCCAAC… hypothetical protein