Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Sort ascending Gene ID
3343_ssr5020-sacB GTGATTCGTAACTTTAAAGATAAAG… hypothetical protein
3091_sll0445-sacB ATGCAAAAAATTTATGCCATCGGTG… hypothetical protein
2335_slr0468-sacB ATGGCACTCCCGAGCAAATTCAATC… hypothetical protein
2145_slr0771-sacB ATGGCAAACAGGATTAAATTTCATC… hypothetical protein
2209_sll0024-sacB GTGAAAATTACTTGTTTAAAACATA… hypothetical protein
1893_slr0442-sacB ATGAATACTCGCTTTTTCCTCAATT… hypothetical protein
1767_sll1089-sacB ATGAAGTACTCACTATTTGTCGCTA… hypothetical protein
1515_ssl2420-sacB ATGAATACCCAATTAGTAGAATCCT… hypothetical protein
1390_ssr3532-sacB ATGGTTACAACTTTTAGCAAACCAT… hypothetical protein
1012_sll1267-sacB GTGGGGCAAATTTCAACTTTTACGG… hypothetical protein
0824_slr2071-sacB ATGTTTAAATTCCTTGCCAATAATT… hypothetical protein
0508_ssr3129-sacB ATGTGTTTTTTTATTATCCAAGAGG… hypothetical protein
0572_ssl1911-sacB ATGTCTACTCAACAACAGGCTCGCG… hypothetical protein
0194_sll1032-sacB ATGCAGTTACCGCCCGTTCACAGTG… hypothetical protein ccmN
3500_slr6045-sacB ATGCTCTTAACCAGTATGGATCAAA… hypothetical protein
3374_slr5051-sacB ATGCCAACAGTTGAAACTGACTTGG… hypothetical protein
3248_slr7080-sacB ATGGTTAGTTATCATTTGCACCTGA… hypothetical protein
2934_slr1429-sacB ATGGAAGCCAAGATCGAACAACGGC… hypothetical protein
2682_slr0112-sacB GTGGTCATGAGAAACGCTTTAACTA… hypothetical protein
2304_sll0069-sacB ATGACCTATTGTTTGGGTTTAATTA… hypothetical protein
1422_slr2105-sacB ATGGCTCGGCTTACTGCTCTATTTC… hypothetical protein
1486_slr2127-sacB ATGGCCACCACCCCCCAAGAAGTCT… hypothetical protein
1170_slr1816-sacB ATGAAAATTGAAAAGCAAGTTAATG… hypothetical protein
1234_sll0839-sacB ATGCCAAGACCTTGCTGTTTAAAAT… hypothetical protein
0666_sll1570-sacB GTGGTGAAATCAGAATCAGGTATTT… hypothetical protein
0604_slr1376-sacB ATGCTACACCGGAAAATCTATCAAC… hypothetical protein
0414_sll1516-sacB ATGGGCAAAACCCCCCTGGGACTGA… hypothetical protein
0226_slr1789-sacB ATGAACTTTTATATTGCTCAAGCTA… hypothetical protein
3532_ssl6077-sacB ATGCTCAAATTTATAGGTATTGCAT… hypothetical protein
3406_sll5083-sacB ATGATATTTCCCTTTGATATAAATA… hypothetical protein
3470_slr6015-sacB ATGAAAATTATTGTTAAATTACAAG… hypothetical protein
3218_sll7050-sacB ATGCTTATTACCCTCGAGCCTACTT… hypothetical protein
3092_sll0444-sacB ATGAAAATTACGGAGATAGTGGCCC… hypothetical protein
2462_slr0207-sacB ATGAATAACCTTACTGATCAGCTTG… hypothetical protein
1203_sll1618-sacB ATGTTGCCGTTGATTTTACCCGCTC… hypothetical protein
1013_sll1265-sacB ATGAGCAATAATCCTTCCCCTCACA… hypothetical protein
0951_ssl2245-sacB ATGTCTATCAATGCTTACAAACTAG… hypothetical protein
0635_slr1395-sacB ATGAAACGTCCCACCCTCTACTGTG… hypothetical protein
3501_ssr6046-sacB ATGGAAAGTAGGCGATTATCTATCC… hypothetical protein
3375_sll5052-sacB ATGGCTCACGATGAAGCAGAAGAAT… hypothetical protein
3249_slr7081-sacB ATGGTCAGCATTCACATTACCCGCC… hypothetical protein
2997_slr1567-sacB ATGAAACTTTTTCATTGGCTACTTT… hypothetical protein
2935_sll1333-sacB ATGACTGTGATTTTTCGTGGTTGGC… hypothetical protein
2809_sll0737-sacB ATGGCCGCCGATTCATCCTCTCCTC… hypothetical protein
2683_slr0114-sacB GTGATGTTCCGCCCCTTGTCCCGGG… hypothetical protein
2493_slr0912-sacB ATGCTATCACTTCAAGACAACTACT… hypothetical protein
2557_sll0827-sacB ATGCCCCGTCCCTTTGACCGATCCA… hypothetical protein
1171_sll1696-sacB ATGGTATTTAAGCTGAATTTACACG… hypothetical protein
1045_sll0863-sacB GTGAAAATTTCAACATCCATGCCCC… hypothetical protein
0541_slr2052-sacB ATGATTGCCCCTATTTGCCGTGCTC… hypothetical protein
0289_slr0962-sacB ATGTTGGCGTTGATGCTATCCGGTG… hypothetical protein
3471_slr6016-sacB ATGACCAGACTCTTTAACCTAGAAT… hypothetical protein
3281_sll8007-sacB ATGCGAATCCTGCTTGATGAATGCG… hypothetical protein
3219_ssl7051-sacB GTGTTCGGAGGGGGCAACCATCTAT… hypothetical protein
3093_sll0443-sacB GTGAAAAGCTGGATTTTGTTCTCTT… hypothetical protein
2903_slr0552-sacB ATGTCCACTGTAATTCCTACCTCCC… hypothetical protein
2841_sll0518-sacB GTGACAAGGGCATTTTTGCTTGGCT… hypothetical protein
2021_sll1851-sacB ATGCGTTATGACAATGGTTGCATTG… hypothetical protein
2085_ssl0312-sacB ATGAGTAACTTAGAACAAATTGAAA… hypothetical protein
1959_ssr0657-sacB ATGATTCCCTTTGCTTCCCAAACCT… hypothetical protein
1769_sll1086-sacB ATGTTACTTTTCCTACTTCCAGGCA… hypothetical protein
1643_sll1873-sacB ATGTTAAAAAAATTGTTTGGCGCTA… hypothetical protein
1204_slr1742-sacB ATGGAATTAACAATCGGCTGGCTTT… hypothetical protein
1014_sll0877-sacB ATGAAACCAACTGGTTGGAACCAAT… hypothetical protein
1078_slr1862-sacB ATGGCGATGTTACCTCTGCCAAACT… hypothetical protein
0636_slr1396-sacB ATGAAAAAACCAGATATTGATGTGT… hypothetical protein
0574_sll0997-sacB ATGGCCCCGAAAAATTCCTGCCACA… hypothetical protein
3250_slr7082-sacB GTGGCTACCATTTCCCAACAAATTA… hypothetical protein
2998_slr1568-sacB ATGAAACCTGAATTTGCCACTGTCC… hypothetical protein
2494_slr0913-sacB ATGAATAAGTTGCCAAAAATCACCA… hypothetical protein
2180_sll0325-sacB ATGCTCGCTAAATATTTTTCTGAAC… hypothetical protein
1738_ssl2162-sacB ATGCAATCCTCACAGACCTGGGCGA… hypothetical protein
1362_slr0262-sacB ATGGCTAATGAGGTCGTTAAAGCTA… hypothetical protein
0858_sll1730-sacB ATGATCTCCATAGATAAAAGTTATG… hypothetical protein
0542_sll1934-sacB ATGAATGCGGCAGAACAAGCCATTG… hypothetical protein
0290_sll0943-sacB ATGTTAAAAATTCTGCAAAAATTAC… hypothetical protein
3534_ssr6079-sacB ATGTTTTTGTTTTTGATTTTAAGGA… hypothetical protein
3408_slr5085-sacB ATGACACTCCCTGCAATTATGAAAT… hypothetical protein
3220_slr7052-sacB ATGGTTGCCCCCTCCGAACACCAGA… hypothetical protein
2778_sll0669-sacB ATGGCTGCCGATGTGCAATATTTTC… hypothetical protein
2652_sll0588-sacB ATGTCATTATTCCCTCTTTTAACCG… hypothetical protein
0088_sll0710-sacB ATGTGGAACTTTTCGCAACTTAATC… hypothetical protein
2148_sll0772-codA ATGGGCTTAATTTGCGGTTTGGCGA… hypothetical protein
1896_ssr0759-sacB GTGTTTGTAACCAGAGTAGCTCTCA… hypothetical protein
1771_ssr1951-sacB ATGGATCCCTTAACCAAATTAGTTT… Hypothetical protein
1141_sll2006-sacB ATGCAAATTACTCTAGACATCCCCG… hypothetical protein
0637_slr1397-sacB ATGGATAATCTAACCGACTTTGCAT… hypothetical protein
0701_ssl3615-sacB ATGAGCACCATCGAGCAAGTTCTCA… hypothetical protein
0449_slr1043-sacB GTGGGGAAATCTATGGTTAGTTCTA… hypothetical protein
3503_ssr6048-sacB ATGACAATAACAACACAAGCTCAAA… hypothetical protein
3251_slr7083-sacB ATGACAAGTCAAAATTTTGTTTCTG… hypothetical protein
3125_slr1187-sacB ATGACTGACTACTCCGCCCTTGATA… hypothetical protein
2495_slr0914-sacB ATGATTAACTTTTCCGAAAACAGGA… hypothetical protein
0121_slr0238-sacB ATGAGATTAATTAAACAAATTGTGG… hypothetical protein
2307_sll0066-codA ATGGCTGATCGATTTTCTCCATCAG… hypothetical protein
1363_slr0263-sacB ATGCGGGTAGAGAATATTACCCAAG… hypothetical protein
1237_slr0867-sacB GTGCGTTTATTGTATCTAGCCCGAC… hypothetical protein
0985_slr1450-sacB ATGTTCAACTTTTTTGTCAGACTGT… hypothetical protein
3535_slr6080-sacB ATGTTTAAAAAATTAGGTGAAGTAG… hypothetical protein
3157_slr0601-sacB ATGTCCACGGAAAACCCCATCGAAA… hypothetical protein
3221_ssl7053-sacB ATGTTGGAAGAAACGATCGCCGTAA… hypothetical protein
3095_sll0442-sacB ATGGCTCTAATAGCAAGACTGATCG… hypothetical protein
2465_slr0209-sacB ATGGCTAGATCAAACAAGGACGATA… hypothetical protein
2271_sll0191-sacB ATGAACAGGGGAGCAAAAGTAAAGA… hydroxylase
1803_sll1556-sacB ATGGATAGCACCCCCCACCGTAAGT… Hydroxyacid reductase
1517_sll1223-sacB ATGTCTGTTGTTACTTTAACCATTG… hydrogenase subunit hoxU
1519_sll1221-sacB ATGGACATTAAAGAATTAAAGGAAA… hydrogenase subunit hoxF
1516_sll1224-sacB ATGGCTAAAATTCGTTTTGCTACCG… hydrogenase small subunit hoxY
1102_slr1876-sacB ATGCCAGGCCAATCCACCAAGTCCA… hydrogenase maturation protease
0719_sll1078-sacB ATGCATGAAACAGACATGACCAAAG… hydrogenase maturation nickel metallochaperone HypA hypA2
1513_sll1226-sacB ATGTCTAAAACCATTGTTATCGATC… hydrogenase large subunit hoxH
0044_slr1498-sacB ATGAAATACGTTGATGAATATCGGG… hydrogenase isoenzymes formation protein; HypD hypD
1734_sll1432-sacB ATGTGCCAAAACTGCGGTTGTAGTG… hydrogenase isoenzymes formation protein; HypB hypB
0900_sll1462-sacB GTGAACTTAGTCTGTCCCGTTCCCC… hydrogenase expression/formation protein; HypE hypE
1602_ssl3580-sacB ATGTGTCTAGCCCTACCTGGCCAGG… hydrogenase expression/formation protein; HypC hypC
1779_slr1675-sacB ATGCACGAAGTTAGTCTGATGGAGC… hydrogenase expression/formation protein; HypA hypA
1799_ssl3044-sacB GTGACCATTACCTTTGTTAAAGAGC… hydrogenase component
0718_sll1079-sacB ATGCACCAATCCATTGACACGGCGA… hydrogenase accessory protein HypB hypB
1138_slr2135-sacB ATGCTAGGGTTGGGGACTAAGTTTA… hydrogenase accessory protein hupE
1804_sll1555-sacB ATGCCCAAAATTTTGATAATTGAAG… hybrid sensory kinase
1619_slr1969-sacB ATGCTACCCGCTTTTTCCCCCATTT… hybrid sensory kinase
1307_sll1905-sacB ATGTCCCCATCCCAGCCCCACCCAC… hybrid sensory kinase hik19
1497_slr1324-sacB GTGGAAGTAGAATACAGTGGAGTGT… hybrid sensory kinase
2254_slr0222-codA ATGCCTATCATTCCTAGCCCCAAAG… hybrid sensory kinase
1507_sll1229-sacB ATGGGCCCGGACTGTAAAACCCTTT… hybrid sensory kinase hik41
1414_slr2098-sacB ATGTTTTGGCAACCTGTTAGTCCCC… hybrid sensory kinase hik21
1508_sll1228-sacB GTGCGTTTTGCCATAGAGCAACTGG… hybrid sensory kinase hik4
0375_slr1400-sacB ATGGGAACAGCTTCCCTTCTGGTGG… hybrid sensory kinase hik38
1415_slr2099-sacB ATGGATACAGCAACAACCAAGGGCA… hybrid sensory kinase
1420_slr2104-sacB ATGAAGTCTTTTTTCCTCAACACAT… hybrid sensory kinase rre22
0478_slr1759-sacB ATGGTTATTAGTGCCACTGTGATAT… hybrid sensory kinase hik14
0228_sll1672-sacB ATGCAAATCAATAACCATGTTTTCA… hybrid sensory kinase
2816_sll0043-sacB ATGCTCAACTCCGACATTCGTGACC… hybrid sensor histidine kinase/response regulator
0420_sll1512-sacB ATGGAAAAGGTTTTCCCTCATACTG… HxlR family transcriptional regulator
0577_ssr1698-sacB ATGGCTGATCCCCTCACCCCTGCTA… HugZ family protein
2833_sll0030-sacB ATGAAAAATGCCACCCTCCACCAAT… HTH-type transcriptional activator cmpR
2592_slr0086-sacB GTGCCCTACGCCATTGATTTTGGTA… Hsp70 family protein
1396_sll1988-sacB ATGGCAGACCAATTGATCCGCGCCA… Hsp33 family molecular chaperone HslO hslO
0418_sll1514-sacB ATGTCTCTCATTCTTTACAATCCCC… Hsp20/alpha crystallin family protein hsp17
2726_slr0789-sacB ATGGTTGACTACAGGAAAGCCCGAT… HPP family protein
1113_sll1760-sacB ATGGTCAGCTTTACCGTTTCTGTGC… homoserine kinase thrB
2357_sll0455-sacB GTGACAGTTAAAATTGGTTTACTCG… homoserine dehydrogenase thrA
1196_slr1736-sacB ATGGCAACTATCCAAGCTTTTTGGC… homogentisate phytyltransferase
3127_slr1189-sacB GTGGGAGGAACAACAGGCGGTGGAA… homocysteine S-methyltransferase
3070_sll1547-sacB ATGAGCAAAAAAGTAGCGGCCCTGG… Holliday junction resolvase ruvX
2382_sll0613-sacB ATGGCCATTAAACGTTCCGGCAACA… Holliday junction DNA helicase; RuvB ruvB
1016_sll0876-sacB ATGATTCAATTTCTTCAGGGCCAGG… Holliday junction DNA helicase; RuvA ruvA
2892_sll0896-sacB ATGGATCAAACTGAAGCGGCCCAAC… Holliday juction resolvase; RuvC
3549_slr6094-sacB ATGAAAGATAACCGTTATTCTCCTG… HNH nucleases
1943_slr0393-sacB ATGAATGAAGATTTAGATAATGACT… HNH endonuclease< DUF433 domain-containing protein
3350_ssl5027-sacB ATGAAGAATAATCGTTATTCTCCTG… HNH endonuclease
3225_slr7057-sacB ATGACAAGGACTCTGCCACCTGTGT… HNH endonuclease
3387_ssl5064-sacB ATGAAAGATAACCGGTATTCTCCTG… HNH endonuclease
0270_sll1193-sacB ATGGCTAAGGTTTTAGTCCTCAACG… HNH endonuclease
3453_sll5130-sacB GTGCGATTCAACGATTCTGAGATTG… HNH endonuclease
3422_ssl5099-sacB ATGAAAGGTGATCATTATTCTCCTA… HNH endonuclease
3244_slr7076-sacB ATGTCGCTGGACACGCTGGTGCCGG… HNH endonuclease
1391_slr2080-sacB ATGCCAATCAGTGAAGATCTCAAAC… HNH endonuclease
1140_sll2007-sacB ATGAGTAAGAGCTATATTTCCCCAT… HNH endonuclease
3314_sll8040-sacB ATGGAAATACTTACACGGTACAACT… HNH endonuclease
1686_sll1181-sacB ATGAATAGCCCCACCCAGGAACATG… HlyD family of secretion proteins hlyD
0810_slr1207-sacB GTGCCCATGGCCATGCCCCTTGTCC… HlyD family efflux transporter periplasmic adaptor subunit
1931_sll0260-sacB ATGTTTTCCTCTTCTGTTGAGCTGG… HlyC/CorC family transporter, hemolysin
1687_sll1180-sacB ATGAGTCTGACCATTGCCGATTATC… HlyB family hlyB
2205_slr0357-sacB ATGGGAGCTATCCAAGCCATTCGTG… histidyl-tRNA synthetase hisS
2990_slr1560-sacB ATGATTCACCATCCCCCCGCTGGGG… histidyl tRNA synthetase hisS
0879_sll1713-sacB ATGGCAGGCTGTCCAGCTTTTTCTT… histidinol-phosphate aminotransferase hisC
1283_sll1958-sacB ATGGGAGAAGCTTTAAACAAAGGGA… histidinol phosphate aminotransferase hisC
0502_slr1848-sacB GTGACTCGTATTCTTAAGCTCTCGC… histidinol dehydrogenase hisD
0385_slr0682-sacB ATGTTACGTCTCATCACCCAGTCCG… histidinol dehydrogenase hisD
2408_sll0395-sacB ATGACCCTCAATCTCTACTTTTTGC… histidine phosphatase family protein
0916_slr1748-sacB ATGGCCCTCAAACTTTATTTCCTGC… histidine phosphatase family protein
3062_sll1549-sacB ATGAAATGGGCTAACCGGTTGCTAT… histidine phosphatase family protein
1980_sll0146-sacB ATGAACTTTGGCTATCTGATTTTTT… high-affinity branched-chain amino acid transport protein; BraE
0803_slr1200-sacB GTGTCAGTACTCCTAGAAGGCATTT… high-affinity branched-chain amino acid transport protein livH
1834_slr0949-sacB ATGGATCTATCACAGTTAATCTTTA… high-affinity branched-chain amino acid transport permease protein livH
1117_slr1881-sacB ATGTCTGACCTCCTCGTTGTTAAGG… high-affinity branched-chain amino acid transport ATP-binding protein; BraG livF
2157_sll0764-sacB ATGACCAGCAAAATCTTAGAAATTC… high-affinity branched-chain amino acid transport ATP-binding protein livG
0631_ssl2542-sacB ATGACCACCCGTGGCTTCCGCTTGG… high light-inducible protein hliA/scpC
0891_ssr2595-sacB ATGACTAGCCGCGGATTTCGCCTCG… high light inducible protein hilB/scpD
0371_ssr1789-sacB ATGAGTGAAGAACTACAACCGAACC… high light inducible protein hliD/scpE
0207_slr1776-sacB GTGATTAAACAAATATTTCCCATTT… high affinity sulfate transporter
2452_slr0201-sacB ATGATTACTGCCCTTGAATATGCCT… heterodisulfide reductase subunit B hdrB
2696_slr0298-sacB ATGGCTGTCTGTCCCACCTGTAATC… heterocyst to vegetative cell connection protein, FHA domain-containing protein fraH
1293_sll1951-sacB ATGGCACTAAGTCCTAACGTAATTG… hemolysin
1578_sll1254-sacB ATGCTGGAAATTGTAGCGGCCATTT… hemolysin
1058_slr1406-sacB GTGAAAGTGAGCAAACGTTTTTTCC… heme-binding protein
1062_sll1307-sacB ATGCTCAAATTTACTTTTACTCCGC… heme-binding protein
0286_sll1184-sacB ATGAGTGTCAACTTAGCTTCCCAGT… heme oxygenase ho1
1641_sll1875-sacB ATGACTAACCTTGCACAAAAACTCC… heme oxygenase ho2
0208_sll1685-sacB ATGTTACCTGACAAAAAACTCGGTT… heme binding protein precursor ycf10
1604_sll1898-sacB GTGACTGGGGTTTTTCTCCCCCCCT… heme A synthase
3511_slr6056-sacB ATGAAAAAAGTAGGATTTGATATCA… helix-turn-helix domain-containing protein
2300_sll0072-sacB ATGACTAATATTCCTTACCGAGAAA… helix-turn-helix domain-containing protein
2949_sll1366-sacB ATGGCGACTATCCACGGTAATTGGC… helicase of the snf2/rad54 family
3502_slr6047-sacB ATGTCTTCAATCTATGACAATTGTG… helicase
2323_sll0057-sacB ATGAACGAAGATCAAGTTTCCCTCG… heat shock protein; GrpE grpE
3111_sll0430-sacB ATGGCAGTACTCGAAAAAGGCAATA… heat shock protein htpG
0179_slr1098-sacB GTGAGAAAATATGGAGCTATGCGTA… HEAT repeat domain-containing protein
0244_sll1663-sacB ATGAGTGATTCCCTCACCGCCATCA… HEAT repeat domain-containing protein