Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name CDS Gene Homology Sort descending Gene ID
3062_sll1549-sacB ATGAAATGGGCTAACCGGTTGCTAT… histidine phosphatase family protein
2408_sll0395-sacB ATGACCCTCAATCTCTACTTTTTGC… histidine phosphatase family protein
0502_slr1848-sacB GTGACTCGTATTCTTAAGCTCTCGC… histidinol dehydrogenase hisD
0385_slr0682-sacB ATGTTACGTCTCATCACCCAGTCCG… histidinol dehydrogenase hisD
1283_sll1958-sacB ATGGGAGAAGCTTTAAACAAAGGGA… histidinol phosphate aminotransferase hisC
0879_sll1713-sacB ATGGCAGGCTGTCCAGCTTTTTCTT… histidinol-phosphate aminotransferase hisC
2990_slr1560-sacB ATGATTCACCATCCCCCCGCTGGGG… histidyl tRNA synthetase hisS
2205_slr0357-sacB ATGGGAGCTATCCAAGCCATTCGTG… histidyl-tRNA synthetase hisS
1687_sll1180-sacB ATGAGTCTGACCATTGCCGATTATC… HlyB family hlyB
1931_sll0260-sacB ATGTTTTCCTCTTCTGTTGAGCTGG… HlyC/CorC family transporter, hemolysin
0810_slr1207-sacB GTGCCCATGGCCATGCCCCTTGTCC… HlyD family efflux transporter periplasmic adaptor subunit
1686_sll1181-sacB ATGAATAGCCCCACCCAGGAACATG… HlyD family of secretion proteins hlyD
3422_ssl5099-sacB ATGAAAGGTGATCATTATTCTCCTA… HNH endonuclease
3244_slr7076-sacB ATGTCGCTGGACACGCTGGTGCCGG… HNH endonuclease
1391_slr2080-sacB ATGCCAATCAGTGAAGATCTCAAAC… HNH endonuclease
1140_sll2007-sacB ATGAGTAAGAGCTATATTTCCCCAT… HNH endonuclease
3314_sll8040-sacB ATGGAAATACTTACACGGTACAACT… HNH endonuclease
3350_ssl5027-sacB ATGAAGAATAATCGTTATTCTCCTG… HNH endonuclease
3225_slr7057-sacB ATGACAAGGACTCTGCCACCTGTGT… HNH endonuclease
3387_ssl5064-sacB ATGAAAGATAACCGGTATTCTCCTG… HNH endonuclease
0270_sll1193-sacB ATGGCTAAGGTTTTAGTCCTCAACG… HNH endonuclease
3453_sll5130-sacB GTGCGATTCAACGATTCTGAGATTG… HNH endonuclease
1943_slr0393-sacB ATGAATGAAGATTTAGATAATGACT… HNH endonuclease< DUF433 domain-containing protein
3549_slr6094-sacB ATGAAAGATAACCGTTATTCTCCTG… HNH nucleases
2892_sll0896-sacB ATGGATCAAACTGAAGCGGCCCAAC… Holliday juction resolvase; RuvC
1016_sll0876-sacB ATGATTCAATTTCTTCAGGGCCAGG… Holliday junction DNA helicase; RuvA ruvA
2382_sll0613-sacB ATGGCCATTAAACGTTCCGGCAACA… Holliday junction DNA helicase; RuvB ruvB
3070_sll1547-sacB ATGAGCAAAAAAGTAGCGGCCCTGG… Holliday junction resolvase ruvX
3127_slr1189-sacB GTGGGAGGAACAACAGGCGGTGGAA… homocysteine S-methyltransferase
1196_slr1736-sacB ATGGCAACTATCCAAGCTTTTTGGC… homogentisate phytyltransferase
2357_sll0455-sacB GTGACAGTTAAAATTGGTTTACTCG… homoserine dehydrogenase thrA
1113_sll1760-sacB ATGGTCAGCTTTACCGTTTCTGTGC… homoserine kinase thrB
2726_slr0789-sacB ATGGTTGACTACAGGAAAGCCCGAT… HPP family protein
0418_sll1514-sacB ATGTCTCTCATTCTTTACAATCCCC… Hsp20/alpha crystallin family protein hsp17
1396_sll1988-sacB ATGGCAGACCAATTGATCCGCGCCA… Hsp33 family molecular chaperone HslO hslO
2592_slr0086-sacB GTGCCCTACGCCATTGATTTTGGTA… Hsp70 family protein
2833_sll0030-sacB ATGAAAAATGCCACCCTCCACCAAT… HTH-type transcriptional activator cmpR
0577_ssr1698-sacB ATGGCTGATCCCCTCACCCCTGCTA… HugZ family protein
0420_sll1512-sacB ATGGAAAAGGTTTTCCCTCATACTG… HxlR family transcriptional regulator
2816_sll0043-sacB ATGCTCAACTCCGACATTCGTGACC… hybrid sensor histidine kinase/response regulator
1507_sll1229-sacB ATGGGCCCGGACTGTAAAACCCTTT… hybrid sensory kinase hik41
1414_slr2098-sacB ATGTTTTGGCAACCTGTTAGTCCCC… hybrid sensory kinase hik21
1508_sll1228-sacB GTGCGTTTTGCCATAGAGCAACTGG… hybrid sensory kinase hik4
1415_slr2099-sacB ATGGATACAGCAACAACCAAGGGCA… hybrid sensory kinase
0375_slr1400-sacB ATGGGAACAGCTTCCCTTCTGGTGG… hybrid sensory kinase hik38
1420_slr2104-sacB ATGAAGTCTTTTTTCCTCAACACAT… hybrid sensory kinase rre22
0478_slr1759-sacB ATGGTTATTAGTGCCACTGTGATAT… hybrid sensory kinase hik14
0228_sll1672-sacB ATGCAAATCAATAACCATGTTTTCA… hybrid sensory kinase
1804_sll1555-sacB ATGCCCAAAATTTTGATAATTGAAG… hybrid sensory kinase
1619_slr1969-sacB ATGCTACCCGCTTTTTCCCCCATTT… hybrid sensory kinase
1307_sll1905-sacB ATGTCCCCATCCCAGCCCCACCCAC… hybrid sensory kinase hik19
1497_slr1324-sacB GTGGAAGTAGAATACAGTGGAGTGT… hybrid sensory kinase
2254_slr0222-codA ATGCCTATCATTCCTAGCCCCAAAG… hybrid sensory kinase
1138_slr2135-sacB ATGCTAGGGTTGGGGACTAAGTTTA… hydrogenase accessory protein hupE
0718_sll1079-sacB ATGCACCAATCCATTGACACGGCGA… hydrogenase accessory protein HypB hypB
1799_ssl3044-sacB GTGACCATTACCTTTGTTAAAGAGC… hydrogenase component
1779_slr1675-sacB ATGCACGAAGTTAGTCTGATGGAGC… hydrogenase expression/formation protein; HypA hypA
1602_ssl3580-sacB ATGTGTCTAGCCCTACCTGGCCAGG… hydrogenase expression/formation protein; HypC hypC
0900_sll1462-sacB GTGAACTTAGTCTGTCCCGTTCCCC… hydrogenase expression/formation protein; HypE hypE
1734_sll1432-sacB ATGTGCCAAAACTGCGGTTGTAGTG… hydrogenase isoenzymes formation protein; HypB hypB
0044_slr1498-sacB ATGAAATACGTTGATGAATATCGGG… hydrogenase isoenzymes formation protein; HypD hypD
1513_sll1226-sacB ATGTCTAAAACCATTGTTATCGATC… hydrogenase large subunit hoxH
0719_sll1078-sacB ATGCATGAAACAGACATGACCAAAG… hydrogenase maturation nickel metallochaperone HypA hypA2
1102_slr1876-sacB ATGCCAGGCCAATCCACCAAGTCCA… hydrogenase maturation protease
1516_sll1224-sacB ATGGCTAAAATTCGTTTTGCTACCG… hydrogenase small subunit hoxY
1517_sll1223-sacB ATGTCTGTTGTTACTTTAACCATTG… hydrogenase subunit hoxU
1519_sll1221-sacB ATGGACATTAAAGAATTAAAGGAAA… hydrogenase subunit hoxF
1803_sll1556-sacB ATGGATAGCACCCCCCACCGTAAGT… Hydroxyacid reductase
2271_sll0191-sacB ATGAACAGGGGAGCAAAAGTAAAGA… hydroxylase
0210_slr1778-sacB ATGAATATTTCTTTTATTTCTTCGA… hypothetical protein
3516_ssl6061-sacB ATGGGCGGACATCCACAAGGAAAGT… hypothetical protein
3264_slr7096-sacB GTGAGATATAAAAATAATTGTCGAA… hypothetical protein
2446_slr0195-sacB ATGGATACCCTTTCCCCCAGACTTT… hypothetical protein
2320_slr0061-sacB ATGCTAAAAAAAATTTTCATTCTCG… hypothetical protein
1942_slr0392-sacB ATGCTTATGAGGAGGCAAAAATTGG… hypothetical protein
1626_sll1886-sacB ATGCGAATTTGGCCAGTGGTGCTGA… hypothetical protein
1374_slr0269-sacB ATGCCATCTACTTTTTCCCAACCAT… hypothetical protein
0494_slr1770-sacB ATGCACTATACCTTTGATATTTTGG… hypothetical protein
0242_sll1665-sacB ATGGAAACTTTATCTTTGGTGTTGG… hypothetical protein
3484_slr6029-sacB ATGCTCCTAGCCGAAATTCTCGAAA… hypothetical protein
3106_slr0459-sacB ATGGAAATGGGTCGGCCAGTGCAAT… hypothetical protein
2980_slr0666-sacB ATGGACAACGCGACAATCACTGCAA… hypothetical protein
2352_slr0489-sacB ATGGCAACCTTCTTGGCCCTATTAC… hypothetical protein
1722_sll1442-sacB ATGAAATTGCCCTACGGAAACCAAG… hypothetical protein
1596_slr1353-sacB ATGCCAATGTCCAGTCTGATTTCCC… hypothetical protein
3517_ssr6062-sacB ATGGATTTTAATCCCAATGAGTGGC… hypothetical protein
3329_sll5006-sacB ATGTCCATCGCTGGAAAGTCCAAAG… hypothetical protein
3203_ssr7035-sacB GTGCGCCCAATCCAATCTGGGTCAC… hypothetical protein
3077_ssr2781-sacB ATGCCCATGGAAGCCGGACAACAAT… hypothetical protein
2509_sll0556-sacB ATGGAAGGATCATTTTCCCTTACCC… hypothetical protein
2447_slr0196-sacB ATGACCAAAGTGCTAACACCAATGA… hypothetical protein
1879_ssl2971-sacB ATGATGCCATTTTTACTGGTGGTGG… hypothetical protein
1753_slr1162-sacB ATGGATAAATACTCTAATCCAGAGA… hypothetical protein
1627_sll1885-sacB GTGAGGAACAACCGCATGACTTTCA… hypothetical protein
1249_sll1160-sacB ATGAATATTCGTCCCCTTGTTAGTT… hypothetical protein
0557_slr1913-sacB GTGTCTTCCCCGAAAAGCAAAGCCA… hypothetical protein
0431_slr1603-sacB ATGATTGTCGCCTCCGAGGGCAGTG… hypothetical protein
3485_ssr6030-sacB ATGGGACTTTTAAGTTATGGTCTTG… hypothetical protein
3423_ssl5100-sacB ATGCAGTCCTTTAATCGACGATCGC… hypothetical protein
3233_sll7065-sacB ATGGCTAGAAAAGTTACTACACGCT… hypothetical protein
2981_slr0667-sacB ATGTCTAAAAAACAATATCTAAAGC… hypothetical protein
1849_slr0960-sacB ATGGACTGGCTTTTCTATTTGTTCT… hypothetical protein
1407_ssl3769-sacB ATGTTGGTACTTTCCGTCCTATCTT… hypothetical protein
1281_sll1960-sacB GTGCAATTAAGCTTTCAAGAACGTT… hypothetical protein
0590_slr1032-sacB ATGCCCACCCCACAAGCACTGTATC… hypothetical protein
0464_sll1006-sacB ATGGAGGAAAATTTGGGCATGGACA… hypothetical protein
3518_slr6063-sacB ATGTCCATCGCTGGAAAATCCAAAG… hypothetical protein
3392_sll5069-sacB ATGACTCAATTCTACAAGCTAACAA… hypothetical protein
3266_slr7098-sacB ATGTACGACGCGCTATTGCCTATAG… hypothetical protein
3330_ssl5007-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
3204_ssr7036-sacB ATGGAAACAGGGCACTCCATCGCCC… hypothetical protein
2762_slr0699-sacB ATGTTCAAAAATGGTTATTTACTAA… hypothetical protein
1818_slr0937-sacB ATGAATAACTCTGATTTCCTGTCTT… hypothetical protein
1502_ssr2201-sacB ATGCACTCATTGTCATCACTGGAAT… hypothetical protein
0558_slr1914-sacB GTGATGGTAGGTTCGGGGCAATGTG… hypothetical protein
3486_slr6031-sacB ATGAAGCATTATAAAACTTCACACG… hypothetical protein
3424_slr5101-sacB ATGCGAAGACGCAGACCTACCAGGC… hypothetical protein
3234_sll7066-sacB ATGCGAGGAATTGAGATAACCATAA… hypothetical protein
2982_slr0668-sacB ATGCTTAAAAAAGTATCGTTTTCTA… hypothetical protein
2730_slr0793-sacB GTGATGAAAACAATTCAATTAGCAA… hypothetical protein
2668_sll0102-sacB ATGACCCATTCCCCTGAATCCAACC… hypothetical protein
2290_sll0403-codA ATGTCATCTTTTAATCAGATAACTA… hypothetical protein
1030_sll0871-sacB ATGAACACTTTTTTGGCATCCCCTA… hypothetical protein
0904_ssr2611-sacB GTGACCCCTAAAAGTGGTATTCTTC… hypothetical protein
0968_ssr2406-sacB ATGAATGAACCAAAACAGACCGAAA… hypothetical protein
0591_slr1033-sacB ATGACAATACTTTTTACCAAAATTC… hypothetical protein
0401_slr0689-sacB ATGGCGACGATCGCCGAGATTAATG… hypothetical protein
0275_ssr2153-sacB ATGAAATTACAGCATCCCAAACCCC… hypothetical protein
3457_ssr6002-sacB ATGGACTTTAACCCCAATGAGTGGC… hypothetical protein
3267_slr7099-sacB ATGACTGATTTCAAAGCATTGATTG… hypothetical protein
2071_slr0334-sacB ATGAAAAAATTCTCTAGAACTGTTT… hypothetical protein
1755_ssl2148-sacB ATGTTTGCTCTACCCATCCTGGCGG… hypothetical protein
1629_sll1884-sacB GTGCCCATGACCCGTTCCATCCCTA… hypothetical protein
1251_sll1158-sacB ATGATATCTCAATCAATAATTCCCA… hypothetical protein
1315_ssr3402-sacB ATGAAGCAAATTATTCCCGCACTGA… hypothetical protein
1063_sll1306-sacB ATGCAAAGAAGAGATCTGTTTAAAT… hypothetical protein
0811_ssr2016-sacB ATGTTCGCCCCCATCGTTATCTTGG… hypothetical protein
0307_sll0930-sacB GTGGCCGACTATGCCTTCTTCGTTT… hypothetical protein
0181_slr1100-sacB ATGGCAAGACGTAAAAAAACTTTTC… hypothetical protein
3235_sll7067-sacB ATGTTTCTAGTTCTAATTGAGACTT… hypothetical protein
3299_sll8025-sacB ATGAGATTAAAGATTAGTAAGAGAA… hypothetical protein
2857_sll0508-sacB ATGCCCACATCTATGTCGGAATGGA… hypothetical protein
2921_sll1344-sacB GTGGACAGATGCAAATTCTCGAATG… hypothetical protein
2417_sll0382-sacB ATGAAATTTAACCTAGCTCTATTTT… hypothetical protein
2103_ssl0294-codA ATGTTTCTTGAAGAACTTAAGCCAG… hypothetical protein
1977_sll0149-sacB ATGGGTATGCCATGGACCTTGGTGC… hypothetical protein
1599_slr1957-sacB ATGAGACATTTTTGCGACGCTTGGA… hypothetical protein
1096_ssl3383-sacB ATGCGCATTTTAGCTCCCCATCCCC… hypothetical protein
0528_sll1939-sacB ATGACAATATCCCAGGCTCAAAAGG… hypothetical protein
0276_slr1301-sacB GTGCTCTATCTGGCTGAAATTAAGA… hypothetical protein
0088_sll0710-sacB ATGTGGAACTTTTCGCAACTTAATC… hypothetical protein
3268_slr7100-sacB ATGACCATCAACACCGATGCCATTC… hypothetical protein
3332_ssr5009-sacB GTGACAACTGTTACCGATGCAGACC… hypothetical protein
3080_slr1667-sacB ATGTTCACTAAATTCAATCAAGTTC… hypothetical protein
2386_sll0611-sacB ATGAATCCTGAATTTCATCCCCTCC… hypothetical protein
2260_slr0226-sacB ATGAATCCTTGCAAATTTTTTCGTT… hypothetical protein
2198_slr0353-sacB ATGAAAATAGATTATAAATTAACTC… hypothetical protein
2072_ssr0536-sacB ATGAAAAACTTCCCCGCAATGATTG… hypothetical protein
1378_slr0271-codA ATGCGAATCAACCATAAGCCTCTAT… hypothetical protein
1316_slr2004-sacB ATGCACCAAATATCAATGAAGCAAA… hypothetical protein
1126_sll1755-sacB GTGAAGCAATGGAGGAAACTCCCTA… hypothetical protein
0622_sll1293-sacB ATGGTAGAGGACTATTTTTGGATTG… hypothetical protein
3488_slr6033-sacB ATGGAACCCTTAAACACCTCGACCT… hypothetical protein
3362_ssl5039-sacB ATGGATCAAAACGAGTGGGTTATCT… hypothetical protein
3426_ssl5103-sacB GTGGAGTTGATGAAGGATGACCGTT… hypothetical protein
3048_sll0727-sacB ATGCCACGGTCTTTTTTATTACTTT… hypothetical protein wzy
2732_slr0795-sacB ATGGAGACCACATTGCTCCTTTTGT… hypothetical protein
2796_sll0659-sacB ATGAACTATGCAACTACACCCACAG… hypothetical protein
2670_slr0106-sacB ATGAAACAAGAAATTGGCGCTCTAC… hypothetical protein
2418_sll0381-sacB GTGCCTCCAAGGAAAAGTATGCGAT… hypothetical protein
1536_ssl1520-sacB ATGGCCATGGATAAGGATACGAAAT… hypothetical protein
1097_ssl3382-sacB ATGCTGGATAAAACCACGTTGCAAG… hypothetical protein
0845_slr1826-sacB ATGCAGTTTTGCTGGATCATAATTG… hypothetical protein
0655_ssr2848-sacB ATGTTTGATTGTACTGTTGATTGTT… hypothetical protein
0529_ssr3465-sacB ATGTTTAAACAATTAGGAGTTCTGG… hypothetical protein
0151_sll0218-sacB ATGCAACTCCTCTCAACCAATGTGG… hypothetical protein
0215_sll1681-sacB GTGTTTCCCTCAAGTTTGTCGGCGC… hypothetical protein
3269_slr7101-sacB ATGATGATAATTTGCTGGAGGATGA… hypothetical protein
3333_slr5010-sacB ATGAAAATTAACCGTCAGGGGCAGG… hypothetical protein
2765_slr0702-sacB ATGTCTTCTAATTCGTCAAGTAAGT… hypothetical protein
2513_sll0552-sacB ATGAATCCAAGGCACCGAACGACGA… hypothetical protein
2199_sll0314-sacB ATGTTGGTTTTCCTCACCCGTTTTA… hypothetical protein
2073_sll0295-sacB ATGTCACCCTTTGAATCTATGGAAA… hypothetical protein
1443_slr1513-sacB ATGGCTAAACCAGCGAACAAGCTCG… hypothetical protein
0875_sll1717-sacB ATGAGCGTTCTTAAATGGATAAATG… hypothetical protein
0687_slr2018-sacB ATGAAAAATAAAGCGATTGGTAATC… hypothetical protein
0121_slr0238-sacB ATGAGATTAATTAAACAAATTGTGG… hypothetical protein
3237_sll7069-sacB ATGAAAATCATTATTACTGCCAAGG… hypothetical protein
2671_sll0101-sacB ATGCTAGACATAAAACTCTCGTTAC… hypothetical protein
2167_sll0756-codA GTGGGTGAGCTAGCCGTTTTGCCAA… hypothetical protein
1979_sll0147-sacB ATGCGTGAACTGCTCTACTGTGAAG… hypothetical protein
1789_sll1563-sacB GTGTATATCAGAGTGGATTCGACAG… hypothetical protein
1727_sll1439-sacB ATGGATAATTCAGAGCAATGGTACA… hypothetical protein
0908_slr1552-sacB ATGTGGCGTTATCGGTCACCCGAAA… hypothetical protein
0656_slr1704-sacB ATGTTTAATAGTTTTTCGTTCCCTA… hypothetical protein
0342_slr1068-sacB ATGAAAACAACTATTAACGACTACA… hypothetical protein
3522_slr6067-sacB ATGAATTGGCGGGCTTTACTGTTGG… hypothetical protein
3396_slr5073-sacB ATGATTGTTGAACGGTGCTATTTTC… hypothetical protein
3270_slr7102-sacB ATGAAAAAATTACTCAAATCGCTCA… hypothetical protein
3018_sll1476-sacB ATGGGGAAAGGCAAAGCCGATCCAG… hypothetical protein