Plasmids and Cultures

This database contains entries for 3,572 known and predicted gene coding sequences in Synechocystis sp PCC 6803 based on the Kazusa genome sequence and nomenclature (http://genome.microbedb.jp/cyanobase/GCA_000009725.1). Plasmids for generating marked mutants and mutant strains can be searched for by gene Name/Accession (e.g. 'sll1226' or '1513_sll1226-sacB'),  gene homology (e.g. 'hydrogenase large subunit'), Gene ID (e.g. hoxH), or by a portion of the gene coding sequence Sequence (CDS).

Please note, the library is still being completed. Plasmids and/or marked mutants may not be available. Users can also search for available materials by Plasmids made or Mutant made.

Plasmids, mutants and the unmarking spacer plasmid pUC19K-UL are currently available on request. Regardless of the segregation status of the mutant, open reception of a cyanobacterial mutant strain we recommend 1-2 cycles of restreaking on a selection plate containing kanamycin (100 μg/ml).

Name Sort descending CDS Gene Homology Gene ID
0201_slr1110-sacB ATGGGGCCATTGTGGCCTTGTTGGA… DUF1092 family protein
0202_slr1772-sacB ATGGTCGGGGCGATCGCCCGATGGG… linear amide C-N hydrolase
0203_sll1686-sacB ATGTTAGTCACCGACTCTCTTTTGC… TM0106 family RecB-like putative nuclease
0204_ssr2972-sacB GTGTCAGGATTCAATCAACAGTTAA… hypothetical protein
0205_slr1773-sacB ATGTTGAAAAATATTTTTGCCCTGA… DUF2092 domain-containing protein
0206_slr1774-sacB ATGGGCCCAACTATGAAATCTTTAG… hypothetical protein
0207_slr1776-sacB GTGATTAAACAAATATTTCCCATTT… high affinity sulfate transporter
0208_sll1685-sacB ATGTTACCTGACAAAAAACTCGGTT… heme binding protein precursor ycf10
0209_slr1777-sacB ATGACCACCCTGACCCCCTTTATTC… magnesium chelatase ATPase subunit D chlD/bchD
0210_slr1778-sacB ATGAATATTTCTTTTATTTCTTCGA… hypothetical protein
0211_sll1683-sacB ATGGTCAACCTCAATCAACAAGATT… lysine decarboxylase cad
0212_sll1682-sacB ATGGAAATTGGTGTTCCCAAGGAAA… alanine dehydrogenase ald
0213_slr1779-sacB GTGGAGCCAGACCCGATCGCCGCCG… pyridoxal phosphate biosynthetic protein; PdxJ pdxJ
0214_slr1780-sacB GTGGAAAGTTGGGCATTGACGACCC… Ycf54-like protein
0215_sll1681-sacB GTGTTTCCCTCAAGTTTGTCGGCGC… hypothetical protein
0216_sll1680-sacB ATGAAAAGACGTTACCTTTTAGAAG… peptide-methionine (R)-S-oxide reductase msrB
0217_sll1679-sacB ATGAAATATCCCACTTGGTTACGCC… trypsin-like serine protease hhoA
0218_slr1783-sacB GTGGGCTTGAGTTTGCTGCGCCCCA… NarL subfamily response regulator transcription factor rre1
0219_slr1784-sacB ATGTCTGAAAATTTTGCAGTTGCTA… biliverdin reductase bvdR
0220_sll1678-sacB ATGCTCGAATCCGTCGCTGATATTT… spore maturation protein A
0221_sll1677-sacB GTGCTTTCCCCGTCTGGGATGGGGA… spore maturation protein B
0222_sll1676-sacB ATGTTAGATAAACGCTGTAGCGGTA… 4-alpha-glucanotransferase malQ
0223_sll1675-sacB ATGACCCTTTCTTCTGGTTTACCTA… VOC family protein
0224_slr1787-sacB ATGGGCGGTTCTGCCAAATTTTTGT… thiamine-phosphate kinase
0225_slr1788-sacB ATGGTTAGAGCTATACGTCCTCCCA… hypothetical protein
0226_slr1789-sacB ATGAACTTTTATATTGCTCAAGCTA… hypothetical protein
0227_sll1673-sacB ATGGAAAATACCGATGAAAAAAAAG… regulatory components of sensory transduction system
0228_sll1672-sacB ATGCAAATCAATAACCATGTTTTCA… hybrid sensory kinase
0229_sll1671-sacB GTGAACACCATCCATCTACGCCCAT… GNAT family N-acetyltransferase
0230_slr1790-sacB ATGCCCAAGCGCGAGTATTTCTCCC… protoporphyrinogen oxidase HemJ hemJ
0231_slr1791-sacB ATGTCCCATACTCTGACTAAGCTCG… 3-phosphoadenosine-5-phosphosulfate sulfotransferase cysH
0232_sll1670-sacB ATGGTGAAGCCCCTCCGCTTAAACG… CIRCE binding repressor hrcA
0233_sll1669-sacB ATGGCCCAGGATCTAATCAAAGAAC… shikimate kinase aroK
0234_slr1793-sacB ATGGGTAAGAATCTCCTCGAACAAC… transaldolase talB
0235_ssr2998-sacB ATGACGATTGAAATAGGTCAAAAAG… DUF2862 domain-containing protein
0236_slr1794-sacB GTGGCGTTAGTTCTGACTTTTTTAG… arsenic-transporting ATPase
0237_slr1795-sacB GTGGGGTTGGCGATCGCCGTGGGTA… peptide methionine sulfoxide reductase msrA
0238_ssr3000-sacB ATGACCGATATTCAAAAACAGTTAC… DUF2288 domain-containing protein
0239_sll1667-sacB ATGTTAATTTTGAAAAATTCTATGG… mitochondrial outer membrane 72K protein, tetratricopeptide repeat protein mom72
0240_sll1666-sacB GTGTCTTCTAATCCCCATTCCACCC… DnaJ protein dnaJ
0241_slr1796-sacB ATGATTATGTCTGTGTGTTTGCCAT… Cyanobacterial Signature Protein (thylakoid membrane protein)
0242_sll1665-sacB ATGGAAACTTTATCTTTGGTGTTGG… hypothetical protein
0243_sll1664-sacB ATGTTTTTCAGTGTTGTCATTCCCA… glycosyltransferase
0244_sll1663-sacB ATGAGTGATTCCCTCACCGCCATCA… HEAT repeat domain-containing protein
0245_sll1662-sacB ATGCCGCCATTGGTCGTTGCACATT… chorismate mutase /prephenate dehydratase pheA
0246_slr1798-sacB ATGTCGGGTGCTATACCACAAGGCC… diguanylate cyclase pleD
0247_sll1660-sacB ATGAATCGATCAAATCCTACTCCTC… bifunctional (p)ppGpp synthetase/guanosine-3'%2C5'-bis(diphosphate) 3'-pyrophosphohydrolase
0248_sll1659-sacB ATGGTGCTATCTACCGTCAACCTTA… 7%2C8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit CofH cofH
0249_sll1658-sacB ATGGCGCTAGGCTGGGGTCAGACTG… glyoxalase/bleomycin resistance/dioxygenase family protein
0250_slr1799-sacB ATGAATAAGACCTTTAACCTCCCTA… hypothetical protein
0251_slr1800-sacB ATGGTTGAGCTTGCGCCTTCCCCTG… Cyanobacterial Signature Protein
0252_sll1656-sacB ATGAACCGACGCAACACCGAATTGG… DUF3611 family protein
0253_sll1655-sacB ATGGCGGAAATCAGTGACCCTGGGA… biotin acetyl-CoA-carboxylase ligase birA
0254_sll1654-sacB ATGTCGATCAATTGCTGGCGATCGC… universal stress protein
0255_sll1653-sacB ATGAGTAATTCCCTATTAACCCAAC… spore germination protein c2 gerCb
0256_sll1652-sacB ATGTTAAACACTCTCTCCAAGAAGA… Predicted DNA binding protein, CopG/RHH family
0257_slr1289-sacB ATGTACGAAAAACTTCAGCCCCCCA… isocitrate dehydrogenase (NADP+) icd
0258_slr1290-sacB ATGATTGCTCACTCCCCATCTGCCC… Uma2 family endonuclease
0259_sll1201-sacB ATGTTTGACAATCTCTGCAAATTCC… Rpn family recombination-promoting nuclease/putative transposase
0260_slr1291-sacB ATGTTGGAACACTTCCCCTGGCTGA… NADH dehydrogenase subunit 4 ndhD2
0261_sll1200-sacB ATGGGTCAGTATTCTGCGGTTCTGT… MFS transporter
0262_slr1293-sacB ATGGTCCCTAGCAATGCTGAATCTC… C-3'%2C4' desaturase CrtD crtD
0263_ssr2142-sacB ATGGACCTACTCCTTTCTACCCTCG… YggT family protein ycf19
0264_slr1295-sacB ATGGTCCAAAAGTTATCCCGTCGCC… iron transport protein sufA
0265_sll1198-sacB GTGCAGTTTGACGTTCTCACCCTGT… tRNA (m1G37) methyltransferase trmD
0266_ssl2384-sacB ATGTTTGATCGTTCCAACAAAGATT… hypothetical protein
0267_sll1196-sacB ATGGGGGAAATTAAACGCATTGGTA… phosphofructokinase pfkA
0268_slr1298-sacB ATGCTGGCTAAGCTCCGCCAACGCC… FUSC family protein
0269_sll1194-sacB ATGAAATTTATTTCCCGCCTACTGG… photosystem II 12 kD extrinsic protein psbU
0270_sll1193-sacB ATGGCTAAGGTTTTAGTCCTCAACG… HNH endonuclease
0271_slr1299-sacB ATGCGTGTTTGTGTTATCGGAACGG… UDP-glucose dehydrogenase
0272_slr1300-sacB ATGACCTTTGTAGCCGCTTCCATAA… UbiH protein ubiH
0273_sll1192-sacB ATGAATCCTTTATTGCAATGGTTGG… fluoride efflux transporter CrcB crcB
0274_sll1191-sacB ATGCTCGATTTTTTCTGCAGTGGCA… LapA family protein
0275_ssr2153-sacB ATGAAATTACAGCATCCCAAACCCC… hypothetical protein
0276_slr1301-sacB GTGCTCTATCTGGCTGAAATTAAGA… hypothetical protein
0277_slr1302-sacB GTGCCCTGGCATTCTGGCCTGGATT… CO2 hydration protein
0278_slr1303-sacB GTGGTTGAAAATCTTGAAACTATTG… ergothioneine biosynthesis protein EgtB egtB
0279_sll1189-sacB ATGCCCATGGCTGTTGTTTCCCTAC… glycolate oxidase subunit; GlcE glcE
0280_slr1305-sacB ATGTCATCCCCCCAAGTCCCCACAG… regulatory components of sensory transduction system rre41
0281_slr1306-sacB ATGGGGCAACCAGGTCTAACAATGG… DUF697 domain-containing protein
0282_sll1188-sacB ATGAAAAAAGAAATTAATTATTGGG… hypothetical protein
0283_sll1187-sacB ATGATTGAGCAAATATTTTTCGGAC… prolipoprotein diacylglyceryl transferase lgt
0284_sll1186-sacB ATGTTGCTAGCCCTAGACCGCATCA… Uma2 family endonuclease
0285_sll1185-sacB ATGACCGTCTCTCCCACAACCCAGC… coproporphyrinogen III oxidase hemF
0286_sll1184-sacB ATGAGTGTCAACTTAGCTTCCCAGT… heme oxygenase ho1
0287_slr1307-sacB ATGACCTACACAACCCAGCAATTGC… hypothetical protein
0288_ssr1604-sacB ATGGCCCGTCGCTGTCAACTGACCG… 50S ribosomal protein L28 rpl28
0289_slr0962-sacB ATGTTGGCGTTGATGCTATCCGGTG… hypothetical protein
0290_sll0943-sacB ATGTTAAAAATTCTGCAAAAATTAC… hypothetical protein
0291_slr0963-sacB ATGGTAACCACCCCCACCGCTGCCC… ferredoxin-sulfite reductase sir
0292_slr0964-sacB ATGGATTTTGCCTCCGGTTTACCCA… FTR1 family protein
0293_slr0965-sacB ATGAAACTCATCTGTCGTCAAAGTG… DNA polymerase III beta subunit dnaN
0294_slr0966-sacB ATGAACGCTGTTGCCGCTTGTTTTA… tryptophan synthase alpha chain trpA
0295_slr0967-sacB ATGATGAAAACGATCAAAAGTCCAT… pentapeptide repeat-containing protein
0296_sll0939-sacB ATGGAAATTTTGGATCATTATCTGG… DUF1622 domain-containing protein
0297_sll0938-sacB ATGCAATTTGCTGATCGTCTCAACG… aspartate transaminase
0298_ssl1792-sacB ATGGCTTTCTTTAAAAGTTTATTTT… SH3 domain-containing protein
0299_sll0936-sacB ATGGCCAGAGATTTACGGGGATTCA… UbiD family decarboxylase
0300_slr0969-sacB ATGCTAGGGGTTGACAATGATAGAC… precorrin methylase cbiH
0301_slr0971-sacB ATGAAGCTGGTGAAGGATGTACAAC… DUF4335 domain-containing protein
0302_sll0934-sacB ATGATCGTCGTCATGAAAGTCGGCA… carboxysome formation protein, 3-deoxy-7-phosphoheptulonate synthase ccmA/aroF
0303_sll0933-sacB ATGGCTGACCCCACCAATCGAGACC… DUF3464 family protein
0304_ssl1784-sacB ATGTCCTTAACCCAAATCCGTAAAC… 30S ribosomal protein S15 rps15
0305_sll0932-sacB ATGACCCAATTGCACGAAGCCTTTA… permease
0306_sll0931-sacB ATGGCTTCCACCAAAAAGATTTTAC… tetratricopeptide repeat protein
0307_sll0930-sacB GTGGCCGACTATGCCTTCTTCGTTT… hypothetical protein
0308_sll0928-sacB ATGAGTGTAGTTAGTCAAGTTATTT… allophycocyanin-B apcD
0309_sll0927-sacB GTGACAGAAGGCCATCCTGATAAGG… S-adenosylmethionine synthetase metX
0310_sll0926-sacB ATGACAAAAATTTTCGCTGATTCTT… tRNA dihydrouridine(20/20a) synthase DusA dusA
0311_sll0925-sacB ATGGTTGCGCTCTCCTCCAATGGAT… Uma2 family endonuclease
0312_slr0974-sacB GTGGCCGATAAAAGAAGACCCCAAC… initiation factor IF-3 infC
0313_slr0975-sacB GTGGAGGAAACGGTCTTGGACGAAC… hypothetical protein
0314_sll0924-sacB ATGCCCGCCGGTAAAATCCATGACC… hypothetical protein
0315_sll0923-sacB ATGACCTACAGTTACCCAGAATTGC… exopolysaccharide export protein epsB, wzc
0316_sll0922-sacB GTGATTCCAGTTCCTGGGCCGTTAT… hypothetical protein
0317_slr0976-sacB ATGTCAGCAATAACGGCCCAGGAAC… Uma2 family endonuclease
0318_slr0977-sacB ATGAAAACTTCCCCCCCAGAACTGA… ABC transporter
0319_slr0978-sacB GTGCTATTGATTACGATCGCCTTTT… hypothetical protein
0320_slr0980-sacB ATGGAGCAACTTTACGAAAGAGATT… DUF29 domain-containing protein
0321_slr0981-sacB ATGGCTACCGTTTTAGACCTTCAGC… Uma2 family endonuclease
0322_slr0982-sacB ATGTCTGATACAGTCATTCGAGTGG… ABC transporter rfbB
0323_slr0983-sacB ATGAAAGCTGTAATTCTTGCCGGTG… alpha-D-glucose-1-phosphate cytidylyltransferase rfbF
0324_slr0984-sacB ATGCTAGATAAGTCGTTTTGGCAAG… CDP-glucose-46-dehydratase rfbG
0325_slr0985-sacB ATGACTACTATGGGAAGATTTTTGA… dTDP-6-deoxy-L-mannose-dehydrogenase rfbC
0326_slr1610-sacB GTGGCCCCAAGCAATTACCGAATTA… class I SAM-dependent methyltransferase
0327_slr1611-sacB ATGGTTGAAGCAACAGCCCTCACCT… DUF29 domain-containing protein
0328_slr1612-sacB ATGTCTGCCATAACTGCCCAAGAGT… hypothetical protein
0329_slr1613-sacB ATGGTTTTTACATTAGAAAAGTCTC… Uma2 family endonuclease
0330_slr1614-sacB ATGTTTTTACATGTTGTTTCTGCTT… DUF2442 domain-containing protein
0331_slr1615-sacB ATGGCTAAATCCCGCATTTACTACA… perosamine synthetase rfbE
0332_slr1616-sacB ATGAATCAACGAATCAAAGTAATGA… ATP-grasp domain-containing protein
0333_slr1617-sacB ATGAAAATACGTTGGATTACACCAC… NAD(P)-dependent oxidoreductase
0334_slr1618-sacB ATGCACCTAAAAACAGAAAAAGAAC… class I SAM-dependent methyltransferase
0335_slr1619-sacB GTGAATCCATTAGACTCTTTTAAAT… cephalosporin hydroxylase
0336_slr1062-sacB ATGGATCTGAAGCAGGCAGAAGTCG… type II toxin-antitoxin system PemK/MazF family toxin
0337_slr1063-sacB ATGTCCAAAAATGACAAGCCATTAG… glycosyltransferase
0338_slr1064-sacB ATGAAAATCTTTTACGATGGTTTAA… mannosyltransferase B rfbU
0339_slr1065-sacB ATGAATCCAATAGTAAAAGCTCCCA… glycosyltransferase
0340_slr1066-sacB ATGGATAAAAAGCAATTAAAAATCT… glycosyltransferase family 1 protein
0341_slr1067-sacB ATGACCCAGTCTTCCCCACCCAAAA… UDP-glucose-4-epimerase galE
0342_slr1068-sacB ATGAAAACAACTATTAACGACTACA… hypothetical protein
0343_slr1069-sacB GTGGGCAATGAACAAAAAACAGTAT… FkbM family methyltransferase
0344_slr1070-sacB ATGGTGAATCAACAAGAAGAAATTA… glycosyltransferase family 2 protein
0345_slr1071-sacB ATGAGAAAAATTTTTTGTCAGAATG… methyltransferase domain-containing protein
0346_slr1072-sacB ATGAAAATAGCATTAATTTCTGGCA… GDP-D-mannose dehydratase yefA
0347_slr1073-sacB ATGACAACCTCCCAATTAAACCCCG… glycosyltransferase family 1 protein
0348_slr1074-sacB ATGCCCACCATAAGAATTAATAAAT… hypothetical protein
0349_slr1075-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
0350_slr1076-sacB ATGCCTAGAAACCTCAAAGTTCACC… glycosyltransferase family 4 protein
0351_slr1077-sacB ATGAGAATTTCACACATAATTGCAG… glycosyltransferase
0352_ssr1765-sacB ATGAAAAAAGTAACCATGACAGTCA… type II toxin-antitoxin system HicB family antitoxin
0353_ssr1766-sacB GTGAGCAATCTTCCAAGCGTCCAAG… type II toxin-antitoxin system HicA family toxin
0354_slr1078-sacB GTGGCCCAGGCCCACGTTCTCGGAT… UDP-glucose-4-epimerase galE
0355_slr1079-sacB ATGGCAAGTTTTCTGGCTTTACTGC… transcription termination factor Rho; Provisional
0356_ssr1768-sacB ATGAAGATTAAGTACTTTACTGATA… DUF2283 domain-containing protein
0357_slr1081-sacB ATGACCCTCACCGTTGCCATTCCCC… Uma2 family endonuclease
0358_slr1082-sacB ATGGCAAGTTTTCTAGCCTTACTGC… hypothetical protein
0359_slr1083-sacB ATGGTTACCCTGCTGAAATGGACAG… Uma2 family endonuclease
0360_slr1084-sacB ATGCAACTTAATCAATACCAGCAAG… hypothetical protein
0361_slr1085-sacB ATGAAGCTAACCATTCTTAACCAAT… glycosyltransferase WbuB wbuB
0362_slr1087-sacB GTGGCCTGTGGGGTTTCCCCCGATG… hypothetical protein
0363_sll1025-sacB ATGGAAAATTTCGATGCCATTGTGG… FAD-binding oxidoreductase
0364_ssl1972-sacB ATGATCAGCATTGATTTGACCCTTA… Cyanobacterial Signature Protein
0365_sll1024-sacB GTGCTAGTGTGTATGGCCTTTTCCC… hypothetical protein
0366_sll1023-sacB ATGGACTTGTTAGAGTACCAGGCCA… succinate--CoA ligase sucC
0367_sll1022-sacB GTGTCCATGTTTGACTTCGATCTAC… membrane protein
0368_sll1021-sacB ATGCAAAGTAAATTTTGGTTTGAAT… flotillin family protein
0369_sll1020-sacB GTGGGCTGTGACTTCGCCATTGCCA… glycosyltransferase family 2 protein
0370_slr1090-sacB ATGCAATTTATTGATCAAGCGGAGA… GTP-binding protein obgE
0371_ssr1789-sacB ATGAGTGAAGAACTACAACCGAACC… high light inducible protein hliD/scpE
0372_sll1019-sacB ATGGATATTCACCGCTTACCAGCCC… glyoxalase II HAGH1/ gloB
0373_sll1018-sacB ATGGAAACGCAATGTCGACCCCAGG… dihydroorotase pyrC
0374_sll1017-sacB ATGAAACCGAAAAATTTTCCCCTTG… ammonium/methylammonium permease amt2
0375_slr1400-sacB ATGGGAACAGCTTCCCTTCTGGTGG… hybrid sensory kinase hik38
0376_slr0670-sacB ATGTTTAAGCATTGCCTCATTTGTA… universal stress protein
0377_sll0656-sacB GTGTCTAACTTAATTATTACCGGTA… extracellular nuclease nucH
0378_sll0654-sacB ATGACCATTAACAGCGGCGTTAGTT… alkaline phosphatase
0379_slr0676-sacB ATGCAACAACGTGGCGTAACAATTT… adenylylsulfate 3-phosphotransferase cysC
0380_slr0677-sacB GTGAATCCCATTGAGTTGATGCAAA… biopolymer transport ExbB protein exbB
0381_slr0678-sacB ATGGCATCTTCCCCTAAAGCCCCCA… biopolymer transporter ExbD exbD
0382_slr0679-sacB ATGATTTCGGCTCGACAATTGGCCT… Fmu and Fmv protein fmu/fmv
0383_slr0680-sacB ATGACAAAAACTGCTAAAACTAAAC… tellurium resistance terB-like protein
0384_slr0681-sacB GTGGTCTGCTCTATAGTGACGGCGA… calcium/sodium antiporter
0385_slr0682-sacB ATGTTACGTCTCATCACCCAGTCCG… histidinol dehydrogenase hisD
0386_sll0651-sacB ATGTTAAGAGAACTAATCAAGCTCT… transposase
0387_sll0650-sacB ATGGCTTACAGTTTAGATTTAAGGC… transposase
0388_sll0649-sacB ATGTGGGGGAACAGGACTGAATTTA… OmpR subfamily rre3
0389_sll0648-sacB ATGCTCGGCGGTCAATATTATCTCA… lipophilic protein lim
0390_sll0647-sacB GTGGCCGCTAACCTAACCTTTCTTG… MBL fold metallo-hydrolase
0391_sll0646-sacB ATGGGTTGGACCATACCGTCAGCTT… adenylate cyclase cyaA
0392_sll0645-sacB ATGTCTAACCGCCCAGGAAAGTTAC… DUF928 domain-containing protein
0393_sll0644-sacB ATGGTTTATGCCCCTCGCCCATTGC… alpha/beta hydrolase
0394_slr0686-sacB ATGACTAACCAACCCAACCAAGTGG… DUF4870 domain-containing protein
0395_sll0643-sacB ATGGCTCAAACTCCCCTCCGCATTG… urease accessory protein G ureG
0396_slr0687-sacB GTGACTTTTTACCAGCGCAGACTGC… diguanylate cyclase pleD
0397_sll0641-sacB ATGGCCAAACTAAATCTTGCCCATC… hypothetical protein
0398_sll0640-sacB ATGGCCTTTTTGCAAACCTGGCTGG… sulfur deprivation response regulator Sac1
0399_slr0688-sacB ATGCGTGTCATTCTGTGTGGTTACT… polysaccharide pyruvyl transferase CsaB casB
0400_ssr1155-sacB ATGAGTCAAACTAACTACTATCAGA… DUF2949 domain-containing protein